RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C HPR1P17629 752 aaKnown RBP2.55□□□□□ -2
SMD3YLR147C MRPL20P22354 195 aaPredicted RBP2.55□□□□□ -2
SMD3YLR147C RBK1P25332 333 aa2.55□□□□□ -2
SMD3YLR147C SDH4P37298 181 aa2.55□□□□□ -2
SMD3YLR147C LIN1P38852 340 aaPredicted RBP2.55□□□□□ -2
SMD3YLR147C YIL054WP40524 105 aa2.55□□□□□ -2
SMD3YLR147C YGL118CP53132 145 aa2.55□□□□□ -2
SMD3YLR147C YDR222WQ04925 415 aa2.55□□□□□ -2
SMD3YLR147C YLR012CQ07927 99 aa2.55□□□□□ -2
SMD3YLR147C TRM10Q12400 293 aa2.55□□□□□ -2
SMD3YLR147C ARO4P32449 370 aaKnown RBP2.54□□□□□ -2
SMD3YLR147C PET8P38921 284 aa2.54□□□□□ -2
SMD3YLR147C DTD1Q07648 150 aaKnown RBP2.54□□□□□ -2
SMD3YLR147C YPR096CO13587 100 aa2.53□□□□□ -2
SMD3YLR147C INO2P26798 304 aa2.53□□□□□ -2
SMD3YLR147C MEI5P32489 222 aa2.53□□□□□ -2
SMD3YLR147C TKL2P33315 681 aa2.53□□□□□ -2
SMD3YLR147C ASP1P38986 381 aaPredicted RBP2.53□□□□□ -2
SMD3YLR147C SMC2P38989 1170 aaKnown RBP2.53□□□□□ -2
SMD3YLR147C FYV8P46949 817 aaKnown RBP2.53□□□□□ -2
SMD3YLR147C YNR066CP53752 436 aa2.53□□□□□ -2
SMD3YLR147C SGT2Q12118 346 aaKnown RBP2.53□□□□□ -2
SMD3YLR147C TFC7Q12415 435 aa2.53□□□□□ -2
SMD3YLR147C DAL81P21657 970 aa2.52□□□□□ -2.01
SMD3YLR147C VMA5P31412 392 aaKnown RBP2.52□□□□□ -2.01
SMD3YLR147C ACB1P31787 87 aa2.52□□□□□ -2.01
SMD3YLR147C CTM1P38818 585 aa2.52□□□□□ -2.01
SMD3YLR147C YFL040WP43562 540 aa2.52□□□□□ -2.01
SMD3YLR147C RVB1Q03940 463 aaKnown RBP2.52□□□□□ -2.01
SMD3YLR147C UBX2Q04228 584 aa2.52□□□□□ -2.01
SMD3YLR147C ITR2P30606 609 aa2.51□□□□□ -2.01
SMD3YLR147C ALK2P32789 676 aaPredicted RBP2.51□□□□□ -2.01
SMD3YLR147C UIP5P36137 443 aa2.51□□□□□ -2.01
SMD3YLR147C YFR045WP43617 309 aa2.51□□□□□ -2.01
SMD3YLR147C STE23Q06010 1027 aa2.51□□□□□ -2.01
SMD3YLR147C DXO1Q06349 442 aa2.51□□□□□ -2.01
SMD3YLR147C YPL245WQ12179 454 aaKnown RBP2.51□□□□□ -2.01
SMD3YLR147C RPL18AP0CX49 186 aaKnown RBP2.5□□□□□ -2.01
SMD3YLR147C RPL18BP0CX50 186 aaKnown RBP2.5□□□□□ -2.01
SMD3YLR147C VPH1P32563 840 aaKnown RBP2.5□□□□□ -2.01
SMD3YLR147C BUR2Q05949 395 aa2.5□□□□□ -2.01
SMD3YLR147C YPR063CQ12160 140 aa2.5□□□□□ -2.01
SMD3YLR147C ERP3Q12403 225 aa2.5□□□□□ -2.01
SMD3YLR147C CBP2P03874 630 aaPredicted RBP2.49□□□□□ -2.01
SMD3YLR147C RNR2P09938 399 aaKnown RBP2.49□□□□□ -2.01
SMD3YLR147C GAL3P13045 520 aa2.49□□□□□ -2.01
SMD3YLR147C SMI1P32566 505 aa2.49□□□□□ -2.01
SMD3YLR147C SWI3P32591 825 aa2.49□□□□□ -2.01
SMD3YLR147C MED8P38304 223 aa2.49□□□□□ -2.01
SMD3YLR147C SHE4P51534 789 aa2.49□□□□□ -2.01
SMD3YLR147C PPQ1P32945 549 aa2.48□□□□□ -2.01
SMD3YLR147C SUR1P33300 382 aa2.48□□□□□ -2.01
SMD3YLR147C SOP4P39543 234 aaPredicted RBP2.48□□□□□ -2.01
SMD3YLR147C HSH155P49955 971 aaKnown RBP2.48□□□□□ -2.01
SMD3YLR147C YGL088WP53151 121 aa2.48□□□□□ -2.01
SMD3YLR147C YGR168CP53293 376 aa2.48□□□□□ -2.01
SMD3YLR147C YNL040WP53960 456 aaPredicted RBP2.48□□□□□ -2.01
SMD3YLR147C YPL113CQ02961 396 aa2.48□□□□□ -2.01
SMD3YLR147C CSI1Q04368 295 aa2.48□□□□□ -2.01
SMD3YLR147C YOR292CQ08743 309 aa2.48□□□□□ -2.01
SMD3YLR147C ERD1P16151 362 aa2.47□□□□□ -2.01
SMD3YLR147C CDC42P19073 191 aa2.47□□□□□ -2.01
SMD3YLR147C MIG1P27705 504 aa2.47□□□□□ -2.01
SMD3YLR147C EDC2P40023 145 aaPredicted RBP2.47□□□□□ -2.01
SMD3YLR147C INA22P40576 216 aa2.47□□□□□ -2.01
SMD3YLR147C IES3Q12345 250 aa2.47□□□□□ -2.01
SMD3YLR147C TDH2P00358 332 aaKnown RBP2.46□□□□□ -2.02
SMD3YLR147C TDH3P00359 332 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SMD3YLR147C MET2P08465 486 aa2.46□□□□□ -2.02
SMD3YLR147C PRE7P23724 241 aaKnown RBP2.46□□□□□ -2.02
SMD3YLR147C UTR5P32630 166 aa2.46□□□□□ -2.02
SMD3YLR147C BLI1P35727 113 aa2.46□□□□□ -2.02
SMD3YLR147C GPX1P36014 167 aa2.46□□□□□ -2.02
SMD3YLR147C YKL162CP36052 402 aa2.46□□□□□ -2.02
SMD3YLR147C YBR062CP38239 180 aa2.46□□□□□ -2.02
SMD3YLR147C UFD1P53044 361 aa2.46□□□□□ -2.02
SMD3YLR147C YGR016WP53209 190 aa2.46□□□□□ -2.02
SMD3YLR147C IRC4Q03036 179 aa2.46□□□□□ -2.02
SMD3YLR147C SNX41Q04053 625 aa2.46□□□□□ -2.02
SMD3YLR147C YPS1P32329 569 aa2.45□□□□□ -2.02
SMD3YLR147C BUD13P46947 266 aaPredicted RBP2.45□□□□□ -2.02
SMD3YLR147C OKP1P53298 406 aa2.45□□□□□ -2.02
SMD3YLR147C SEC13Q04491 297 aaKnown RBP2.45□□□□□ -2.02
SMD3YLR147C YDR286CQ05530 114 aa2.45□□□□□ -2.02
SMD3YLR147C YLR446WQ06204 433 aa2.45□□□□□ -2.02
SMD3YLR147C VPH2P32341 215 aa2.44□□□□□ -2.02
SMD3YLR147C CSE1P33307 960 aa2.44□□□□□ -2.02
SMD3YLR147C AIM29P36154 155 aa2.44□□□□□ -2.02
SMD3YLR147C YHR035WP38769 630 aa2.44□□□□□ -2.02
SMD3YLR147C UTP25P40498 721 aaKnown RBP2.44□□□□□ -2.02
SMD3YLR147C ECO1P43605 281 aa2.44□□□□□ -2.02
SMD3YLR147C YPL080CQ02826 108 aa2.44□□□□□ -2.02
SMD3YLR147C PGC1Q08959 321 aa2.44□□□□□ -2.02
SMD3YLR147C VIK1Q12045 647 aa2.44□□□□□ -2.02
SMD3YLR147C YAL063C-AQ3E791 96 aa2.44□□□□□ -2.02
SMD3YLR147C KRE1P17260 313 aa2.43□□□□□ -2.02
SMD3YLR147C MCH2P36032 473 aa2.43□□□□□ -2.02
SMD3YLR147C YER084WP40057 128 aa2.43□□□□□ -2.02
SMD3YLR147C SCC4P40090 624 aa2.43□□□□□ -2.02
SMD3YLR147C RLP24Q07915 199 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms