RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YBR071WP38243 211 aa2.18□□□□□ -2.06
CSF1YLR087C VPS52P39904 641 aa2.18□□□□□ -2.06
CSF1YLR087C VRG4P40107 337 aa2.18□□□□□ -2.06
CSF1YLR087C COG1P53079 417 aa2.18□□□□□ -2.06
CSF1YLR087C GPG1P53130 126 aa2.18□□□□□ -2.06
CSF1YLR087C PEX31P53203 462 aa2.18□□□□□ -2.06
CSF1YLR087C RIM13Q03792 727 aa2.18□□□□□ -2.06
CSF1YLR087C PRM6Q04705 352 aa2.18□□□□□ -2.06
CSF1YLR087C YLR118CQ12354 227 aa2.18□□□□□ -2.06
CSF1YLR087C YPR1Q12458 312 aa2.18□□□□□ -2.06
CSF1YLR087C TRK1P12685 1235 aa2.18□□□□□ -2.06
CSF1YLR087C GAL3P13045 520 aa2.18□□□□□ -2.06
CSF1YLR087C TRR1P29509 319 aaKnown RBP2.18□□□□□ -2.06
CSF1YLR087C BET3P36149 193 aa2.18□□□□□ -2.06
CSF1YLR087C MRPL4P36517 319 aa2.18□□□□□ -2.06
CSF1YLR087C SPL2P38839 148 aa2.18□□□□□ -2.06
CSF1YLR087C GTT3P39996 337 aa2.18□□□□□ -2.06
CSF1YLR087C TIR3P40552 269 aa2.18□□□□□ -2.06
CSF1YLR087C ECM27P47144 725 aa2.18□□□□□ -2.06
CSF1YLR087C SHH4Q06236 168 aa2.18□□□□□ -2.06
CSF1YLR087C FMP25Q08023 583 aa2.18□□□□□ -2.06
CSF1YLR087C YNG1Q08465 219 aa2.18□□□□□ -2.06
CSF1YLR087C YOR238WQ08634 303 aa2.18□□□□□ -2.06
CSF1YLR087C PAU19P0CE85 124 aa2.17□□□□□ -2.06
CSF1YLR087C PAU21P0CE86 164 aa2.17□□□□□ -2.06
CSF1YLR087C PAU22P0CE87 164 aa2.17□□□□□ -2.06
CSF1YLR087C RPS4AP0CX35 261 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C RPS4BP0CX36 261 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C GAP1P19145 602 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C MSN1P22148 382 aa2.17□□□□□ -2.06
CSF1YLR087C LSB5P25369 354 aa2.17□□□□□ -2.06
CSF1YLR087C PAU3P25610 124 aa2.17□□□□□ -2.06
CSF1YLR087C APT2P36973 181 aa2.17□□□□□ -2.06
CSF1YLR087C PGM2P37012 569 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C SHE3P38272 425 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C YHR033WP38690 423 aa2.17□□□□□ -2.06
CSF1YLR087C EFM1P38732 585 aa2.17□□□□□ -2.06
CSF1YLR087C PET130P47065 347 aa2.17□□□□□ -2.06
CSF1YLR087C YMR178WQ03219 274 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C TMN2Q04562 672 aa2.17□□□□□ -2.06
CSF1YLR087C BSC2Q05611 235 aa2.17□□□□□ -2.06
CSF1YLR087C YPL257WQ08974 193 aa2.17□□□□□ -2.06
CSF1YLR087C SVS1Q12254 260 aa2.17□□□□□ -2.06
CSF1YLR087C SFM1Q12314 213 aa2.17□□□□□ -2.06
CSF1YLR087C FLP1P03870 423 aa2.17□□□□□ -2.06
CSF1YLR087C ADH3P07246 375 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C ADH7P25377 361 aa2.17□□□□□ -2.06
CSF1YLR087C GCS1P35197 352 aa2.17□□□□□ -2.06
CSF1YLR087C SHR5P41912 237 aa2.17□□□□□ -2.06
CSF1YLR087C YJR141WP47172 347 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C DIE2P50076 525 aa2.17□□□□□ -2.06
CSF1YLR087C PPT1P53043 513 aa2.17□□□□□ -2.06
CSF1YLR087C MRPL19P53875 158 aa2.17□□□□□ -2.06
CSF1YLR087C YNL035CP53962 389 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C YAT1P80235 687 aa2.17□□□□□ -2.06
CSF1YLR087C YPL108WQ02872 168 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C TRM11Q12463 433 aa2.17□□□□□ -2.06
CSF1YLR087C CTF3Q12748 733 aa2.17□□□□□ -2.06
CSF1YLR087C TAO3P40468 2376 aa2.17□□□□□ -2.06
CSF1YLR087C TRP4P07285 380 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C CKA1P15790 372 aa2.17□□□□□ -2.06
CSF1YLR087C YCR085WP25650 117 aa2.17□□□□□ -2.06
CSF1YLR087C AEP1P32493 518 aa2.17□□□□□ -2.06
CSF1YLR087C UPS2P35200 230 aa2.17□□□□□ -2.06
CSF1YLR087C ADD66P36040 267 aa2.17□□□□□ -2.06
CSF1YLR087C SHM2P37291 469 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C YBR220CP38318 560 aa2.17□□□□□ -2.06
CSF1YLR087C SWC5P38326 303 aa2.17□□□□□ -2.06
CSF1YLR087C AIM46P38885 310 aa2.17□□□□□ -2.06
CSF1YLR087C YER158CP40095 573 aa2.17□□□□□ -2.06
CSF1YLR087C SFH5P47008 294 aa2.17□□□□□ -2.06
CSF1YLR087C RTA1P53047 317 aa2.17□□□□□ -2.06
CSF1YLR087C NIF3P53081 288 aa2.17□□□□□ -2.06
CSF1YLR087C SYF2P53277 215 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C IRC15Q02733 499 aa2.17□□□□□ -2.06
CSF1YLR087C AIM34Q03673 198 aa2.17□□□□□ -2.06
CSF1YLR087C DCR2Q05924 578 aa2.17□□□□□ -2.06
CSF1YLR087C YDR306CQ06640 478 aa2.17□□□□□ -2.06
CSF1YLR087C AIM39Q08223 395 aa2.17□□□□□ -2.06
CSF1YLR087C MSB2P32334 1306 aa2.17□□□□□ -2.06
CSF1YLR087C GLT1Q12680 2145 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C CHL1P22516 861 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C YJL068CP40363 299 aa2.17□□□□□ -2.06
CSF1YLR087C PHO86P46956 311 aa2.17□□□□□ -2.06
CSF1YLR087C RSM19P53733 91 aaPredicted RBP2.17□□□□□ -2.06
CSF1YLR087C RTT103Q05543 409 aa2.17□□□□□ -2.06
CSF1YLR087C YLR173WQ06247 608 aa2.17□□□□□ -2.06
CSF1YLR087C PHO92Q06390 306 aa2.17□□□□□ -2.06
CSF1YLR087C YLR050CQ12155 161 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C FRE7Q12333 620 aa2.17□□□□□ -2.06
CSF1YLR087C MIP1P15801 1254 aa2.17□□□□□ -2.06
CSF1YLR087C PRE7P23724 241 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C MKK2P32491 506 aa2.17□□□□□ -2.06
CSF1YLR087C TMT1P32643 299 aa2.17□□□□□ -2.06
CSF1YLR087C SER1P33330 395 aaKnown RBP2.17□□□□□ -2.06
CSF1YLR087C SCD5P34758 872 aa2.17□□□□□ -2.06
CSF1YLR087C THI2P38141 450 aa2.17□□□□□ -2.06
CSF1YLR087C YGL159WP53110 370 aa2.17□□□□□ -2.06
CSF1YLR087C PIB2P53191 635 aa2.17□□□□□ -2.06
CSF1YLR087C GOR1P53839 350 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms