RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C GAL3P13045 520 aa2.77□□□□□ -1.97
SDO1YLR022C DAP2P18962 818 aa2.77□□□□□ -1.97
SDO1YLR022C STP22P25604 385 aa2.77□□□□□ -1.97
SDO1YLR022C ERV1P27882 189 aa2.77□□□□□ -1.97
SDO1YLR022C AGA1P32323 725 aa2.77□□□□□ -1.97
SDO1YLR022C SSE1P32589 693 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C SSE2P32590 693 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C YEL043WP32618 956 aa2.77□□□□□ -1.97
SDO1YLR022C PTR2P32901 601 aa2.77□□□□□ -1.97
SDO1YLR022C YHL037CP38733 133 aa2.77□□□□□ -1.97
SDO1YLR022C RTT105P40063 208 aa2.77□□□□□ -1.97
SDO1YLR022C AVT7P40501 490 aa2.77□□□□□ -1.97
SDO1YLR022C PAC11P40960 533 aa2.77□□□□□ -1.97
SDO1YLR022C YPI1P43587 155 aa2.77□□□□□ -1.97
SDO1YLR022C URB2P47108 1174 aa2.77□□□□□ -1.97
SDO1YLR022C STE24P47154 453 aa2.77□□□□□ -1.97
SDO1YLR022C YJR149WP47177 404 aa2.77□□□□□ -1.97
SDO1YLR022C KAP114P53067 1004 aa2.77□□□□□ -1.97
SDO1YLR022C ROG1P53118 685 aa2.77□□□□□ -1.97
SDO1YLR022C SMM1P53720 384 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SDO1YLR022C APC4Q04601 652 aa2.77□□□□□ -1.97
SDO1YLR022C HRI1Q05905 244 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C YLR446WQ06204 433 aa2.77□□□□□ -1.97
SDO1YLR022C ESA1Q08649 445 aa2.77□□□□□ -1.97
SDO1YLR022C RTC5Q12108 567 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C MED2Q12124 431 aa2.77□□□□□ -1.97
SDO1YLR022C BPH1P25356 2167 aa2.76□□□□□ -1.97
SDO1YLR022C RNA1P11745 407 aaKnown RBP2.76□□□□□ -1.97
SDO1YLR022C RPL3P14126 387 aaKnown RBP2.76□□□□□ -1.97
SDO1YLR022C YCR099CP25657 155 aa2.76□□□□□ -1.97
SDO1YLR022C YME2P32843 850 aa2.76□□□□□ -1.97
SDO1YLR022C YBR144CP34215 104 aa2.76□□□□□ -1.97
SDO1YLR022C MRP21P38175 177 aa2.76□□□□□ -1.97
SDO1YLR022C GGC1P38988 300 aa2.76□□□□□ -1.97
SDO1YLR022C SOK1P40317 901 aa2.76□□□□□ -1.97
SDO1YLR022C EFM4P40516 257 aa2.76□□□□□ -1.97
SDO1YLR022C PTR3P43606 678 aa2.76□□□□□ -1.97
SDO1YLR022C APT1P49435 187 aaKnown RBP2.76□□□□□ -1.97
SDO1YLR022C YGR015CP53208 328 aa2.76□□□□□ -1.97
SDO1YLR022C GAS3Q03655 524 aa2.76□□□□□ -1.97
SDO1YLR022C AEP3Q12089 606 aa2.76□□□□□ -1.97
SDO1YLR022C PST1Q12355 444 aa2.76□□□□□ -1.97
SDO1YLR022C URA2P07259 2214 aaKnown RBP2.76□□□□□ -1.97
SDO1YLR022C CBP6P07253 162 aaPredicted RBP2.75□□□□□ -1.97
SDO1YLR022C NSP1P14907 823 aaKnown RBP2.75□□□□□ -1.97
SDO1YLR022C YBL055CP34220 418 aaPredicted RBP2.75□□□□□ -1.97
SDO1YLR022C KKQ8P36004 724 aa2.75□□□□□ -1.97
SDO1YLR022C TPO5P36029 618 aa2.75□□□□□ -1.97
SDO1YLR022C ASC1P38011 319 aaKnown RBP2.75□□□□□ -1.97
SDO1YLR022C HSM3P38348 480 aa2.75□□□□□ -1.97
SDO1YLR022C APQ12P40532 138 aa2.75□□□□□ -1.97
SDO1YLR022C SGN1P40561 250 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SDO1YLR022C IDP2P41939 412 aa2.75□□□□□ -1.97
SDO1YLR022C YFL051CP43552 160 aa2.75□□□□□ -1.97
SDO1YLR022C MDE1P47095 244 aa2.75□□□□□ -1.97
SDO1YLR022C CWC22P53333 577 aaKnown RBP2.75□□□□□ -1.97
SDO1YLR022C MNT4P53745 580 aa2.75□□□□□ -1.97
SDO1YLR022C SKO1Q02100 647 aa2.75□□□□□ -1.97
SDO1YLR022C MSC1Q03104 513 aa2.75□□□□□ -1.97
SDO1YLR022C RRP40Q08285 240 aaKnown RBP2.75□□□□□ -1.97
SDO1YLR022C AYT1Q12226 474 aa2.75□□□□□ -1.97
SDO1YLR022C YIL002W-AQ3E7Z5 69 aa2.75□□□□□ -1.97
SDO1YLR022C SRN2Q99176 213 aa2.75□□□□□ -1.97
SDO1YLR022C YOS9Q99220 542 aa2.75□□□□□ -1.97
SDO1YLR022C HEM2P05373 342 aa2.74□□□□□ -1.97
SDO1YLR022C CDC21P06785 304 aa2.74□□□□□ -1.97
SDO1YLR022C SSC1P0CS90 654 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C RPL20AP0CX23 172 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C RPL20BP0CX24 172 aaPredicted RBP2.74□□□□□ -1.97
SDO1YLR022C PEP5P12868 1029 aa2.74□□□□□ -1.97
SDO1YLR022C ART10P18634 518 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C BOS1P25385 244 aa2.74□□□□□ -1.97
SDO1YLR022C YEF1P32622 495 aa2.74□□□□□ -1.97
SDO1YLR022C YET1P35723 206 aa2.74□□□□□ -1.97
SDO1YLR022C SLM4P38247 162 aa2.74□□□□□ -1.97
SDO1YLR022C RRT2P38332 387 aa2.74□□□□□ -1.97
SDO1YLR022C AYR1P40471 297 aa2.74□□□□□ -1.97
SDO1YLR022C PGU1P47180 361 aa2.74□□□□□ -1.97
SDO1YLR022C YJR154WP47181 346 aa2.74□□□□□ -1.97
SDO1YLR022C YGR149WP48236 432 aa2.74□□□□□ -1.97
SDO1YLR022C IMD4P50094 524 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C MDM34P53083 459 aa2.74□□□□□ -1.97
SDO1YLR022C ERV25P54837 211 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C LSM3P57743 89 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C SHR3Q02774 210 aa2.74□□□□□ -1.97
SDO1YLR022C DBP9Q06218 594 aaKnown RBP2.74□□□□□ -1.97
SDO1YLR022C COS7Q07788 383 aa2.74□□□□□ -1.97
SDO1YLR022C UAF30Q08747 228 aa2.74□□□□□ -1.97
SDO1YLR022C RLM1Q12224 676 aa2.74□□□□□ -1.97
SDO1YLR022C MDY2Q12285 212 aa2.74□□□□□ -1.97
SDO1YLR022C TFB5Q3E7C1 72 aaPredicted RBP2.74□□□□□ -1.97
SDO1YLR022C REP1P03871 373 aa2.73□□□□□ -1.97
SDO1YLR022C SPS4P09937 338 aa2.73□□□□□ -1.97
SDO1YLR022C YHR214C-DP0CX93 97 aa2.73□□□□□ -1.97
SDO1YLR022C ATR1P13090 542 aa2.73□□□□□ -1.97
SDO1YLR022C RSR1P13856 272 aa2.73□□□□□ -1.97
SDO1YLR022C TAL1P15019 335 aaKnown RBP2.73□□□□□ -1.97
SDO1YLR022C ERD1P16151 362 aa2.73□□□□□ -1.97
SDO1YLR022C SPO7P18410 259 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms