RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W TPK3P05986 398 aa2.08□□□□□ -2.08
NUP100YKL068W PPR1P07272 904 aaPredicted RBP2.08□□□□□ -2.08
NUP100YKL068W ARF1P11076 181 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W KIN3P22209 435 aa2.08□□□□□ -2.08
NUP100YKL068W RFA3P26755 122 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W VPS21P36017 210 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W RFT1P38206 574 aaPredicted RBP2.08□□□□□ -2.08
NUP100YKL068W CCT4P39078 528 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W FMP52P40008 231 aa2.08□□□□□ -2.08
NUP100YKL068W THO1P40040 218 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W RPC17P47076 161 aa2.08□□□□□ -2.08
NUP100YKL068W HMS2P47175 358 aa2.08□□□□□ -2.08
NUP100YKL068W LYS20P48570 428 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W NIF3P53081 288 aa2.08□□□□□ -2.08
NUP100YKL068W LSG1P53145 640 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W GPI15P53961 229 aa2.08□□□□□ -2.08
NUP100YKL068W CDC14Q00684 551 aa2.08□□□□□ -2.08
NUP100YKL068W MRS2Q01926 470 aa2.08□□□□□ -2.08
NUP100YKL068W YPL014WQ02606 381 aa2.08□□□□□ -2.08
NUP100YKL068W HER2Q03557 464 aa2.08□□□□□ -2.08
NUP100YKL068W GIS1Q03833 894 aa2.08□□□□□ -2.08
NUP100YKL068W THI3Q07471 609 aa2.08□□□□□ -2.08
NUP100YKL068W RIO1Q12196 484 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W HEM2P05373 342 aa2.08□□□□□ -2.08
NUP100YKL068W SNA3P14359 133 aa2.08□□□□□ -2.08
NUP100YKL068W CTR86P25355 563 aa2.08□□□□□ -2.08
NUP100YKL068W DBP7P36120 742 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W FAA2P39518 744 aa2.08□□□□□ -2.08
NUP100YKL068W YAL037WP39728 267 aa2.08□□□□□ -2.08
NUP100YKL068W YFL015CP43578 164 aa2.08□□□□□ -2.08
NUP100YKL068W TMA22P47089 198 aaPredicted RBP2.08□□□□□ -2.08
NUP100YKL068W HOC1P47124 396 aa2.08□□□□□ -2.08
NUP100YKL068W OKP1P53298 406 aa2.08□□□□□ -2.08
NUP100YKL068W KRE28Q04431 385 aa2.08□□□□□ -2.08
NUP100YKL068W SEC13Q04491 297 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W RAD34Q06665 692 aa2.08□□□□□ -2.08
NUP100YKL068W ASR1Q06834 288 aa2.08□□□□□ -2.08
NUP100YKL068W PLB3Q08108 686 aa2.08□□□□□ -2.08
NUP100YKL068W APC9Q12107 265 aa2.08□□□□□ -2.08
NUP100YKL068W RPS13P05756 151 aaKnown RBP2.07□□□□□ -2.08
NUP100YKL068W WHI2P12611 486 aa2.07□□□□□ -2.08
NUP100YKL068W MNS1P32906 549 aa2.07□□□□□ -2.08
NUP100YKL068W ATO2P32907 282 aa2.07□□□□□ -2.08
NUP100YKL068W YOX1P34161 385 aa2.07□□□□□ -2.08
NUP100YKL068W ECM15P35195 104 aa2.07□□□□□ -2.08
NUP100YKL068W YBR056WP38081 501 aa2.07□□□□□ -2.08
NUP100YKL068W FIG1P38224 298 aa2.07□□□□□ -2.08
NUP100YKL068W SRP14P38985 146 aa2.07□□□□□ -2.08
NUP100YKL068W SOP4P39543 234 aaPredicted RBP2.07□□□□□ -2.08
NUP100YKL068W CDC1P40986 491 aa2.07□□□□□ -2.08
NUP100YKL068W IDP2P41939 412 aa2.07□□□□□ -2.08
NUP100YKL068W MKC7P53379 596 aa2.07□□□□□ -2.08
NUP100YKL068W DIG1Q03063 452 aaKnown RBP2.07□□□□□ -2.08
NUP100YKL068W YDR209CQ03480 137 aa2.07□□□□□ -2.08
NUP100YKL068W YMR034CQ05131 434 aaPredicted RBP2.07□□□□□ -2.08
NUP100YKL068W SEC10Q06245 871 aa2.07□□□□□ -2.08
NUP100YKL068W MCH4Q08268 501 aa2.07□□□□□ -2.08
NUP100YKL068W ATG34Q12292 412 aa2.07□□□□□ -2.08
NUP100YKL068W FLO11P08640 1367 aa2.07□□□□□ -2.08
NUP100YKL068W QCR2P07257 368 aa2.07□□□□□ -2.08
NUP100YKL068W PET494P07390 489 aaPredicted RBP2.07□□□□□ -2.08
NUP100YKL068W FAR1P21268 830 aa2.07□□□□□ -2.08
NUP100YKL068W CLB2P24869 491 aa2.07□□□□□ -2.08
NUP100YKL068W COX13P32799 129 aa2.07□□□□□ -2.08
NUP100YKL068W ZRT1P32804 376 aa2.07□□□□□ -2.08
NUP100YKL068W MRPL6P32904 214 aa2.07□□□□□ -2.08
NUP100YKL068W AIM3P38266 947 aaKnown RBP2.07□□□□□ -2.08
NUP100YKL068W BMT2P38278 337 aa2.07□□□□□ -2.08
NUP100YKL068W MET30P39014 640 aa2.07□□□□□ -2.08
NUP100YKL068W ERV46P39727 415 aa2.07□□□□□ -2.08
NUP100YKL068W YER184CP39961 794 aa2.07□□□□□ -2.08
NUP100YKL068W SHO1P40073 367 aa2.07□□□□□ -2.08
NUP100YKL068W POG1P40473 351 aa2.07□□□□□ -2.08
NUP100YKL068W ADO1P47143 340 aaKnown RBP2.07□□□□□ -2.08
NUP100YKL068W JHD2P47156 728 aaPredicted RBP2.07□□□□□ -2.08
NUP100YKL068W ERG13P54839 491 aaKnown RBP2.07□□□□□ -2.08
NUP100YKL068W PRP38Q00723 242 aaPredicted RBP2.07□□□□□ -2.08
NUP100YKL068W PEX10Q05568 337 aa2.07□□□□□ -2.08
NUP100YKL068W NDE2Q07500 545 aa2.07□□□□□ -2.08
NUP100YKL068W YDL144CQ07589 356 aa2.07□□□□□ -2.08
NUP100YKL068W ESA1Q08649 445 aa2.07□□□□□ -2.08
NUP100YKL068W IPP1P00817 287 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W HEM15P16622 393 aa2.06□□□□□ -2.08
NUP100YKL068W ARF2P19146 181 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W RPS2P25443 254 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W VAM7P32912 316 aa2.06□□□□□ -2.08
NUP100YKL068W IST2P38250 946 aa2.06□□□□□ -2.08
NUP100YKL068W TRM5P38793 499 aa2.06□□□□□ -2.08
NUP100YKL068W TDA11P38854 504 aa2.06□□□□□ -2.08
NUP100YKL068W SEO1P39709 593 aa2.06□□□□□ -2.08
NUP100YKL068W ALG8P40351 577 aa2.06□□□□□ -2.08
NUP100YKL068W NDC80P40460 691 aa2.06□□□□□ -2.08
NUP100YKL068W TAD2P47058 250 aa2.06□□□□□ -2.08
NUP100YKL068W YJR154WP47181 346 aa2.06□□□□□ -2.08
NUP100YKL068W YPT32P51996 222 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W CPD1P53314 239 aa2.06□□□□□ -2.08
NUP100YKL068W LGE1Q02796 332 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W VBA1Q04301 562 aa2.06□□□□□ -2.08
NUP100YKL068W PEX12Q04370 399 aa2.06□□□□□ -2.08
NUP100YKL068W YOL024WQ08172 172 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms