RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W HMS1Q12398 434 aa4.81□□□□□ -1.64
PRP40YKL012W IZH2Q12442 317 aa4.81□□□□□ -1.64
PRP40YKL012W RSR1P13856 272 aa4.8□□□□□ -1.64
PRP40YKL012W PET123P17558 318 aa4.8□□□□□ -1.64
PRP40YKL012W COY1P34237 679 aa4.8□□□□□ -1.64
PRP40YKL012W AGP3P43548 558 aa4.8□□□□□ -1.64
PRP40YKL012W YGL242CP53066 181 aa4.8□□□□□ -1.64
PRP40YKL012W CRH1P53301 507 aa4.8□□□□□ -1.64
PRP40YKL012W SUR7P54003 302 aa4.8□□□□□ -1.64
PRP40YKL012W GRX3Q03835 250 aa4.8□□□□□ -1.64
PRP40YKL012W BER1Q06688 274 aaKnown RBP4.8□□□□□ -1.64
PRP40YKL012W YLR012CQ07927 99 aa4.8□□□□□ -1.64
PRP40YKL012W VPS15P22219 1454 aa4.79□□□□□ -1.64
PRP40YKL012W REP1P03871 373 aa4.79□□□□□ -1.64
PRP40YKL012W MIR1P23641 311 aaKnown RBP4.79□□□□□ -1.64
PRP40YKL012W NAM9P27929 486 aa4.79□□□□□ -1.64
PRP40YKL012W ATG18P43601 500 aa4.79□□□□□ -1.64
PRP40YKL012W SED5Q01590 340 aa4.79□□□□□ -1.64
PRP40YKL012W IRC25Q07951 179 aa4.79□□□□□ -1.64
PRP40YKL012W MCT1Q12283 360 aa4.79□□□□□ -1.64
PRP40YKL012W ATP6P00854 259 aa4.78□□□□□ -1.64
PRP40YKL012W PMT2P31382 759 aa4.78□□□□□ -1.64
PRP40YKL012W MRX5P47007 382 aa4.78□□□□□ -1.64
PRP40YKL012W BIR1P47134 954 aa4.78□□□□□ -1.64
PRP40YKL012W YLR173WQ06247 608 aa4.78□□□□□ -1.64
PRP40YKL012W NAG1Q8TGN9 163 aa4.78□□□□□ -1.64
PRP40YKL012W PMT4P46971 762 aa4.78□□□□□ -1.64
PRP40YKL012W RDL2Q08742 149 aaKnown RBP4.78□□□□□ -1.64
PRP40YKL012W YOL107WQ12239 342 aa4.78□□□□□ -1.64
PRP40YKL012W SFM1Q12314 213 aa4.78□□□□□ -1.64
PRP40YKL012W ERP3Q12403 225 aa4.78□□□□□ -1.64
PRP40YKL012W HPR1P17629 752 aaKnown RBP4.77□□□□□ -1.65
PRP40YKL012W PRR1P28708 518 aa4.77□□□□□ -1.65
PRP40YKL012W GCG1P32656 232 aaKnown RBP4.77□□□□□ -1.65
PRP40YKL012W SKG6P32900 734 aaPredicted RBP4.77□□□□□ -1.65
PRP40YKL012W COS9P36034 407 aa4.77□□□□□ -1.65
PRP40YKL012W HEM14P40012 539 aa4.77□□□□□ -1.65
PRP40YKL012W GAS2Q06135 555 aa4.77□□□□□ -1.65
PRP40YKL012W PLP2Q12017 286 aa4.77□□□□□ -1.65
PRP40YKL012W TAF10Q12030 206 aa4.77□□□□□ -1.65
PRP40YKL012W ATP16Q12165 160 aa4.77□□□□□ -1.65
PRP40YKL012W TY3A-GQ12173 290 aa4.77□□□□□ -1.65
PRP40YKL012W TY3A-IQ99219 290 aa4.77□□□□□ -1.65
PRP40YKL012W YRF1-1P0CX20 1796 aa4.77□□□□□ -1.65
PRP40YKL012W YRF1-5P0CX21 1796 aa4.77□□□□□ -1.65
PRP40YKL012W YRF1-8P0CX22 1796 aa4.77□□□□□ -1.65
PRP40YKL012W YSR3P23501 404 aa4.76□□□□□ -1.65
PRP40YKL012W RVS161P25343 265 aaKnown RBP4.76□□□□□ -1.65
PRP40YKL012W GEA2P39993 1459 aaKnown RBP4.76□□□□□ -1.65
PRP40YKL012W MOB2P43563 287 aa4.76□□□□□ -1.65
PRP40YKL012W AIM23P47015 356 aa4.76□□□□□ -1.65
PRP40YKL012W KAP114P53067 1004 aa4.76□□□□□ -1.65
PRP40YKL012W YPL077CQ02831 240 aa4.76□□□□□ -1.65
PRP40YKL012W SNX41Q04053 625 aa4.76□□□□□ -1.65
PRP40YKL012W FSH2Q05015 223 aa4.76□□□□□ -1.65
PRP40YKL012W GMC2Q06201 188 aa4.76□□□□□ -1.65
PRP40YKL012W GDB1Q06625 1536 aa4.76□□□□□ -1.65
PRP40YKL012W IZH4Q99393 312 aa4.76□□□□□ -1.65
PRP40YKL012W SSK22P25390 1331 aaPredicted RBP4.76□□□□□ -1.65
PRP40YKL012W TDH3P00359 332 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
PRP40YKL012W RPL31AP0C2H8 113 aaKnown RBP4.76□□□□□ -1.65
PRP40YKL012W CTA1P15202 515 aa4.76□□□□□ -1.65
PRP40YKL012W CPR3P25719 182 aa4.76□□□□□ -1.65
PRP40YKL012W LDS1P31379 325 aa4.76□□□□□ -1.65
PRP40YKL012W YER186CP40101 306 aa4.76□□□□□ -1.65
PRP40YKL012W YGR210CP42942 411 aa4.76□□□□□ -1.65
PRP40YKL012W LIA1P47120 325 aaKnown RBP4.76□□□□□ -1.65
PRP40YKL012W GPN3Q06543 272 aa4.76□□□□□ -1.65
PRP40YKL012W PRM4Q12498 284 aa4.76□□□□□ -1.65
PRP40YKL012W ARO1P08566 1588 aaKnown RBP4.75□□□□□ -1.65
PRP40YKL012W RPS14AP06367 137 aaKnown RBP4.75□□□□□ -1.65
PRP40YKL012W MSF1P08425 469 aa4.75□□□□□ -1.65
PRP40YKL012W CBS2P14905 389 aa4.75□□□□□ -1.65
PRP40YKL012W GIT1P25346 518 aa4.75□□□□□ -1.65
PRP40YKL012W RPS14BP39516 138 aaKnown RBP4.75□□□□□ -1.65
PRP40YKL012W BIO3P50277 480 aa4.75□□□□□ -1.65
PRP40YKL012W VAC7P53950 1165 aa4.75□□□□□ -1.65
PRP40YKL012W COX20Q04935 205 aa4.75□□□□□ -1.65
PRP40YKL012W MED4Q12343 284 aa4.75□□□□□ -1.65
PRP40YKL012W PDR10P51533 1564 aa4.74□□□□□ -1.65
PRP40YKL012W COX2P00410 251 aa4.74□□□□□ -1.65
PRP40YKL012W POL30P15873 258 aaKnown RBP4.74□□□□□ -1.65
PRP40YKL012W IMP3P32899 183 aaPredicted RBP4.74□□□□□ -1.65
PRP40YKL012W YKL063CP35725 167 aa4.74□□□□□ -1.65
PRP40YKL012W MCH2P36032 473 aa4.74□□□□□ -1.65
PRP40YKL012W SHQ1P40486 507 aaPredicted RBP4.74□□□□□ -1.65
PRP40YKL012W YAR1P46683 200 aa4.74□□□□□ -1.65
PRP40YKL012W LSB1P53281 241 aa4.74□□□□□ -1.65
PRP40YKL012W SKI8Q02793 397 aaPredicted RBP4.74□□□□□ -1.65
PRP40YKL012W ASR1Q06834 288 aa4.74□□□□□ -1.65
PRP40YKL012W UTP23Q12339 254 aaKnown RBP4.74□□□□□ -1.65
PRP40YKL012W SPO14P36126 1683 aa4.74□□□□□ -1.65
PRP40YKL012W NUP2P32499 720 aa4.73□□□□□ -1.65
PRP40YKL012W KTI12P34253 313 aaKnown RBP4.73□□□□□ -1.65
PRP40YKL012W TDA11P38854 504 aa4.73□□□□□ -1.65
PRP40YKL012W PRM9P39551 298 aa4.73□□□□□ -1.65
PRP40YKL012W YJL118WP47022 219 aa4.73□□□□□ -1.65
PRP40YKL012W YNL134CP53912 376 aaKnown RBP4.73□□□□□ -1.65
PRP40YKL012W PRP38Q00723 242 aaPredicted RBP4.73□□□□□ -1.65
PRP40YKL012W MRX9Q07349 420 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms