RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	CDC7	P06243	507 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	RPS18A	P0CX55	146 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	RPS18B	P0CX56	146 aa	Predicted RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	UGA1	P17649	471 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
CPS1	YJL172W	FPR1	P20081	114 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	PRE1	P22141	198 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	RBK1	P25332	333 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	AHC2	P25649	128 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	PCL2	P25693	308 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	AEP1	P32493	518 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	DAD2	P36162	133 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	RIM2	P38127	377 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	MRP21	P38175	177 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	YHK8	P38776	514 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	IPI1	P38803	334 aa	Predicted RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	YHR097C	P38809	366 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	AIM46	P38885	310 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	YEL020C	P39994	560 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	LSM4	P40070	187 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	RFC4	P40339	323 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	PRM2	P40534	656 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	SLS1	P42900	643 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	GZF3	P42944	551 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	YJR124C	P47159	448 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	YMR178W	Q03219	274 aa	Known RBP	4.54	□□□□□ -1.68
CPS1	YJL172W	TRS31	Q03337	283 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	RIM13	Q03792	727 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	GIS1	Q03833	894 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	PPN1	Q04119	674 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	MRPL1	Q04599	285 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	CTS2	Q06350	511 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	YLR036C	Q07986	203 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	SAS5	Q99314	248 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	PET20	Q99373	253 aa		4.54	□□□□□ -1.68
CPS1	YJL172W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
CPS1	YJL172W	YFR010W-A	P0C5N0	62 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	RPL3	P14126	387 aa	Known RBP	4.53	□□□□□ -1.68
CPS1	YJL172W	ERD2	P18414	219 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	LDS1	P31379	325 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	ARO7	P32178	256 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	AAR2	P32357	355 aa	Predicted RBP	4.53	□□□□□ -1.68
CPS1	YJL172W	RIM1	P32445	135 aa	Known RBP	4.53	□□□□□ -1.68
CPS1	YJL172W	SLC1	P33333	303 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	YBR241C	P38142	488 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	GPX2	P38143	162 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	EFM1	P38732	585 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	BUR6	P40096	142 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	MAD2	P40958	196 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	BIO3	P50277	480 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	NQM1	P53228	333 aa	Predicted RBP	4.53	□□□□□ -1.68
CPS1	YJL172W	CLD1	P53264	445 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	CPR8	P53728	308 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	YNR040W	P53736	256 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	MOT3	P54785	490 aa	Known RBP	4.53	□□□□□ -1.68
CPS1	YJL172W	AAT1	Q01802	451 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	DYN2	Q02647	92 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	FRQ1	Q06389	190 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	IRC10	Q08118	586 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	CRT10	Q08226	957 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	ATX2	Q12067	313 aa		4.53	□□□□□ -1.68
CPS1	YJL172W	CAR1	P00812	333 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	BCY1	P07278	416 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	SEC12	P11655	471 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	CCA1	P21269	546 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	YCK1	P23291	538 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	YCL049C	P25577	312 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	CDC50	P25656	391 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	AFG1	P32317	509 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	SIP1	P32578	815 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	PTM1	P32857	523 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	MNS1	P32906	549 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	TOD6	P34219	525 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	MCH2	P36032	473 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	IRS4	P36115	615 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	SHM2	P37291	469 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	AHP1	P38013	176 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	MUP3	P38734	546 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	MLH1	P38920	769 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	PAN6	P40459	309 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	TIR3	P40552	269 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	YFL012W	P43580	148 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	RPA34	P47006	233 aa	Predicted RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	ADO1	P47143	340 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	PPT1	P53043	513 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	VEL1	P53058	206 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	COG7	P53195	279 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	GND2	P53319	492 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	NUP100	Q02629	959 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	PIR1	Q03178	341 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	YDR124W	Q04608	324 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	EMG1	Q06287	252 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	YLR040C	Q07988	224 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	PER33	Q12144	273 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	MDM32	Q12171	622 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	KCS1	Q12494	1050 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	HBN1	Q96VH4	193 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	YOR338W	Q99326	363 aa		4.52	□□□□□ -1.69
CPS1	YJL172W	ADH2	P00331	348 aa	Known RBP	4.52	□□□□□ -1.69
CPS1	YJL172W	SEC53	P07283	254 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms