RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	DAL5	P15365	543 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	INO2	P26798	304 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	ACB1	P31787	87 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	ZRT1	P32804	376 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	MMS21	P38632	267 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	YHR122W	P38829	231 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	ECM14	P38836	430 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	POP2	P39008	433 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	CAJ1	P39101	391 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	DSE1	P40077	573 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	YMR134W	P40207	237 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	BTT1	P40314	149 aa	Predicted RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	SLM1	P40485	686 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	MIC19	P43594	170 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	FYV8	P46949	817 aa	Known RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	TAF6	P53040	516 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	PXR1	P53335	271 aa	Predicted RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	YLR297W	Q05899	129 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	RRP42	Q12277	265 aa	Predicted RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	SAL1	D6W196	494 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	REP1	P03871	373 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	HPR1	P17629	752 aa	Known RBP	0.7	□□□□□ -2.3
NOP9	YJL010C	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
NOP9	YJL010C	TKL2	P33315	681 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	PEX32	P38292	413 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	TDA11	P38854	504 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	YIA6	P40556	373 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	SDS23	P53172	527 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	YGR266W	P53326	701 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	IRC4	Q03036	179 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	YDR114C	Q04597	100 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	ARC18	Q05933	178 aa	Known RBP	0.7	□□□□□ -2.3
NOP9	YJL010C	MRX9	Q07349	420 aa	Known RBP	0.7	□□□□□ -2.3
NOP9	YJL010C	MIM1	Q08176	113 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	VIK1	Q12045	647 aa		0.7	□□□□□ -2.3
NOP9	YJL010C	GAL3	P13045	520 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	VMA2	P16140	517 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	VPS1	P21576	704 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	DCC1	P25559	380 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	MIG1	P27705	504 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	UTR5	P32630	166 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	ALK2	P32789	676 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	MRPL6	P32904	214 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YKL187C	P34231	750 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	ASP1	P38986	381 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	UTP25	P40498	721 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	ECO1	P43605	281 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	BUD13	P46947	266 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	PMT4	P46971	762 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SHE4	P51534	789 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YPL080C	Q02826	108 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YPL113C	Q02961	396 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	MIX17	Q03667	156 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	CSI1	Q04368	295 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	GTO3	Q04806	366 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YDR222W	Q04925	415 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	DIB1	Q06819	143 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	YPR063C	Q12160	140 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YPL245W	Q12179	454 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	PSY3	Q12318	242 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YDR262W	Q12331	272 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	UTP23	Q12339	254 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	IES3	Q12345	250 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	IZH4	Q99393	312 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	CBP2	P03874	630 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	CDC37	P06101	506 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	MET2	P08465	486 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	RPL18A	P0CX49	186 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	RPL18B	P0CX50	186 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	DAL81	P21657	970 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	RPL16B	P26785	198 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	YPS1	P32329	569 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SUR1	P33300	382 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	CSE1	P33307	960 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SWD2	P36104	329 aa	Predicted RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	UIP5	P36137	443 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SDH4	P37298	181 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	PET8	P38921	284 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YIL012W	P40551	113 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	KEL2	P50090	882 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YGL088W	P53151	121 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SWC4	P53201	476 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	YDR286C	Q05530	114 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	DXO1	Q06349	442 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	PBP4	Q07362	185 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	RLP24	Q07915	199 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	RDL2	Q08742	149 aa	Known RBP	0.69	□□□□□ -2.3
NOP9	YJL010C	YPL264C	Q08980	353 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	ERP3	Q12403	225 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	LAG2	Q92325	660 aa		0.69	□□□□□ -2.3
NOP9	YJL010C	SAR1	P20606	190 aa	Known RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	ICL1	P28240	557 aa	Predicted RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	IMP1	P28627	190 aa		0.68	□□□□□ -2.3
NOP9	YJL010C	ARO4	P32449	370 aa	Known RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	MED8	P38304	223 aa		0.68	□□□□□ -2.3
NOP9	YJL010C	SMC2	P38989	1170 aa	Known RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	EDC2	P40023	145 aa	Predicted RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	YNR066C	P53752	436 aa		0.68	□□□□□ -2.3
NOP9	YJL010C	YNL040W	P53960	456 aa	Predicted RBP	0.68	□□□□□ -2.3
NOP9	YJL010C	CAB5	Q03941	241 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms