RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W RPB9P27999 122 aa3.15□□□□□ -1.91
IMP3YHR148W ZIP1P31111 875 aa3.15□□□□□ -1.91
IMP3YHR148W ZRT3P34240 503 aa3.15□□□□□ -1.91
IMP3YHR148W RFT1P38206 574 aaPredicted RBP3.15□□□□□ -1.91
IMP3YHR148W YDR089WP38966 869 aa3.15□□□□□ -1.91
IMP3YHR148W FET3P38993 636 aa3.15□□□□□ -1.91
IMP3YHR148W END3P39013 349 aa3.15□□□□□ -1.91
IMP3YHR148W BDH1P39714 382 aa3.15□□□□□ -1.91
IMP3YHR148W FRT2P39734 528 aa3.15□□□□□ -1.91
IMP3YHR148W FMP48P53233 369 aa3.15□□□□□ -1.91
IMP3YHR148W HST4P53688 370 aa3.15□□□□□ -1.91
IMP3YHR148W UBX2Q04228 584 aa3.15□□□□□ -1.91
IMP3YHR148W YMR111CQ04461 462 aaPredicted RBP3.15□□□□□ -1.91
IMP3YHR148W APC4Q04601 652 aa3.15□□□□□ -1.91
IMP3YHR148W YLR297WQ05899 129 aa3.15□□□□□ -1.91
IMP3YHR148W RTC5Q12108 567 aaKnown RBP3.15□□□□□ -1.91
IMP3YHR148W STF1P01098 86 aa3.14□□□□□ -1.91
IMP3YHR148W SKG6P32900 734 aaPredicted RBP3.14□□□□□ -1.91
IMP3YHR148W YKL187CP34231 750 aa3.14□□□□□ -1.91
IMP3YHR148W TRR2P38816 342 aa3.14□□□□□ -1.91
IMP3YHR148W PFS2P42841 465 aaKnown RBP3.14□□□□□ -1.91
IMP3YHR148W RIB4P50861 169 aaPredicted RBP3.14□□□□□ -1.91
IMP3YHR148W DBP6P53734 629 aaKnown RBP3.14□□□□□ -1.91
IMP3YHR148W YPL080CQ02826 108 aa3.14□□□□□ -1.91
IMP3YHR148W DTD1Q07648 150 aaKnown RBP3.14□□□□□ -1.91
IMP3YHR148W YDL211CQ12121 372 aa3.14□□□□□ -1.91
IMP3YHR148W FMT1P32785 401 aa3.13□□□□□ -1.91
IMP3YHR148W OKP1P53298 406 aa3.13□□□□□ -1.91
IMP3YHR148W IRC4Q03036 179 aa3.13□□□□□ -1.91
IMP3YHR148W CUR1Q06469 252 aa3.13□□□□□ -1.91
IMP3YHR148W PRM7Q12459 698 aa3.13□□□□□ -1.91
IMP3YHR148W AGA2P32781 87 aa3.12□□□□□ -1.91
IMP3YHR148W YMR262WP38430 313 aa3.12□□□□□ -1.91
IMP3YHR148W CTM1P38818 585 aa3.12□□□□□ -1.91
IMP3YHR148W SOP4P39543 234 aaPredicted RBP3.12□□□□□ -1.91
IMP3YHR148W DIB1Q06819 143 aaPredicted RBP3.12□□□□□ -1.91
IMP3YHR148W SAM4Q08985 325 aaKnown RBP3.12□□□□□ -1.91
IMP3YHR148W CAR2P07991 424 aaKnown RBP3.11□□□□□ -1.91
IMP3YHR148W ERD1P16151 362 aa3.11□□□□□ -1.91
IMP3YHR148W CKA2P19454 339 aa3.11□□□□□ -1.91
IMP3YHR148W MRPL20P22354 195 aaPredicted RBP3.11□□□□□ -1.91
IMP3YHR148W ZRT1P32804 376 aa3.11□□□□□ -1.91
IMP3YHR148W YHR035WP38769 630 aa3.11□□□□□ -1.91
IMP3YHR148W PES4P39684 611 aa3.11□□□□□ -1.91
IMP3YHR148W ZRG17P53735 605 aa3.11□□□□□ -1.91
IMP3YHR148W YNR066CP53752 436 aa3.11□□□□□ -1.91
IMP3YHR148W SMD1Q02260 146 aaPredicted RBP3.11□□□□□ -1.91
IMP3YHR148W SNX41Q04053 625 aa3.11□□□□□ -1.91
IMP3YHR148W MDY2Q12285 212 aa3.11□□□□□ -1.91
IMP3YHR148W YPR1Q12458 312 aa3.11□□□□□ -1.91
IMP3YHR148W BI3Q9ZZW7 517 aa3.11□□□□□ -1.91
IMP3YHR148W GCD2P12754 651 aaPredicted RBP3.1□□□□□ -1.91
IMP3YHR148W YBR062CP38239 180 aa3.1□□□□□ -1.91
IMP3YHR148W SLX1P38324 304 aa3.1□□□□□ -1.91
IMP3YHR148W CDC40P40968 455 aaPredicted RBP3.1□□□□□ -1.91
IMP3YHR148W PBP4Q07362 185 aaKnown RBP3.1□□□□□ -1.91
IMP3YHR148W MNN9P39107 395 aaKnown RBP3.09□□□□□ -1.91
IMP3YHR148W SLM1P40485 686 aa3.09□□□□□ -1.91
IMP3YHR148W GMC1Q04399 608 aa3.09□□□□□ -1.91
IMP3YHR148W YPR195CQ06594 109 aa3.09□□□□□ -1.91
IMP3YHR148W YPL245WQ12179 454 aaKnown RBP3.09□□□□□ -1.91
IMP3YHR148W TRM10Q12400 293 aa3.09□□□□□ -1.91
IMP3YHR148W CPT1P17898 393 aa3.08□□□□□ -1.92
IMP3YHR148W YPC1P38298 316 aa3.08□□□□□ -1.92
IMP3YHR148W MIC19P43594 170 aa3.08□□□□□ -1.92
IMP3YHR148W CPR7P47103 393 aa3.08□□□□□ -1.92
IMP3YHR148W YGL118CP53132 145 aa3.08□□□□□ -1.92
IMP3YHR148W BIO4P53630 237 aa3.08□□□□□ -1.92
IMP3YHR148W VAC14Q06708 880 aa3.08□□□□□ -1.92
IMP3YHR148W UTP23Q12339 254 aaKnown RBP3.08□□□□□ -1.92
IMP3YHR148W PFK27Q12471 397 aaPredicted RBP3.08□□□□□ -1.92
IMP3YHR148W CUP2P15315 225 aa3.07□□□□□ -1.92
IMP3YHR148W INO2P26798 304 aa3.07□□□□□ -1.92
IMP3YHR148W AST1P35183 429 aa3.07□□□□□ -1.92
IMP3YHR148W GPX1P36014 167 aa3.07□□□□□ -1.92
IMP3YHR148W MCH2P36032 473 aa3.07□□□□□ -1.92
IMP3YHR148W YIR035CP40579 254 aa3.07□□□□□ -1.92
IMP3YHR148W COS4P43542 379 aa3.07□□□□□ -1.92
IMP3YHR148W LOC1P43586 204 aaPredicted RBP3.07□□□□□ -1.92
IMP3YHR148W CAX4P53223 239 aa3.07□□□□□ -1.92
IMP3YHR148W YGR266WP53326 701 aa3.07□□□□□ -1.92
IMP3YHR148W ACT1P60010 375 aaKnown RBP3.07□□□□□ -1.92
IMP3YHR148W YOR292CQ08743 309 aa3.07□□□□□ -1.92
IMP3YHR148W APC9Q12107 265 aa3.07□□□□□ -1.92
IMP3YHR148W TFC7Q12415 435 aa3.07□□□□□ -1.92
IMP3YHR148W TDH3P00359 332 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
IMP3YHR148W VOA1P53262 265 aa3.06□□□□□ -1.92
IMP3YHR148W SEC13Q04491 297 aaKnown RBP3.06□□□□□ -1.92
IMP3YHR148W RRG8Q06109 277 aa3.06□□□□□ -1.92
IMP3YHR148W YLR446WQ06204 433 aa3.06□□□□□ -1.92
IMP3YHR148W DCP1Q12517 231 aaPredicted RBP3.06□□□□□ -1.92
IMP3YHR148W RPL5P26321 297 aaKnown RBP3.05□□□□□ -1.92
IMP3YHR148W YIL054WP40524 105 aa3.05□□□□□ -1.92
IMP3YHR148W ASG7P46993 209 aa3.05□□□□□ -1.92
IMP3YHR148W LOH1P47055 219 aa3.05□□□□□ -1.92
IMP3YHR148W UBC13P52490 153 aa3.05□□□□□ -1.92
IMP3YHR148W RFM1Q12192 310 aa3.05□□□□□ -1.92
IMP3YHR148W PRP46Q12417 451 aaPredicted RBP3.05□□□□□ -1.92
IMP3YHR148W LAG2Q92325 660 aa3.05□□□□□ -1.92
IMP3YHR148W RPL31AP0C2H8 113 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms