RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C COX18P53239 316 aa6.93□□□□□ -1.3
SOD2YHR008C YPL108WQ02872 168 aaPredicted RBP6.93□□□□□ -1.3
SOD2YHR008C PRP3Q03338 469 aaPredicted RBP6.93□□□□□ -1.3
SOD2YHR008C CTS2Q06350 511 aa6.93□□□□□ -1.3
SOD2YHR008C YAK1P14680 807 aa6.92□□□□□ -1.3
SOD2YHR008C ELO2P25358 347 aa6.92□□□□□ -1.3
SOD2YHR008C ECM15P35195 104 aa6.92□□□□□ -1.3
SOD2YHR008C YKL071WP36086 256 aa6.92□□□□□ -1.3
SOD2YHR008C YDL186WP48568 277 aa6.92□□□□□ -1.3
SOD2YHR008C SUT1P53032 299 aaKnown RBP6.92□□□□□ -1.3
SOD2YHR008C YDR391CQ04170 232 aa6.92□□□□□ -1.3
SOD2YHR008C ARO10Q06408 635 aa6.92□□□□□ -1.3
SOD2YHR008C YPR097WQ06839 1073 aa6.92□□□□□ -1.3
SOD2YHR008C PRP11Q07350 266 aaPredicted RBP6.92□□□□□ -1.3
SOD2YHR008C SFM1Q12314 213 aa6.92□□□□□ -1.3
SOD2YHR008C NCA2Q12374 616 aa6.92□□□□□ -1.3
SOD2YHR008C CCA1P21269 546 aa6.91□□□□□ -1.3
SOD2YHR008C YEL068CP39977 110 aa6.91□□□□□ -1.3
SOD2YHR008C BUR6P40096 142 aa6.91□□□□□ -1.3
SOD2YHR008C BRR6P53062 197 aa6.91□□□□□ -1.3
SOD2YHR008C YNR064CP53750 290 aa6.91□□□□□ -1.3
SOD2YHR008C LGE1Q02796 332 aaKnown RBP6.91□□□□□ -1.3
SOD2YHR008C SHE9Q04172 456 aa6.91□□□□□ -1.3
SOD2YHR008C SEC13Q04491 297 aaKnown RBP6.91□□□□□ -1.3
SOD2YHR008C IPK1Q06667 281 aa6.91□□□□□ -1.3
SOD2YHR008C MFG1Q07684 458 aa6.91□□□□□ -1.3
SOD2YHR008C RRT8Q08219 342 aa6.91□□□□□ -1.3
SOD2YHR008C YOL163WP0CF20 169 aa6.9□□□□□ -1.3
SOD2YHR008C SAC1P32368 623 aaKnown RBP6.9□□□□□ -1.3
SOD2YHR008C GLC7P32598 312 aaKnown RBP6.9□□□□□ -1.3
SOD2YHR008C APL3P38065 1025 aa6.9□□□□□ -1.3
SOD2YHR008C RPP1P38786 293 aa6.9□□□□□ -1.3
SOD2YHR008C IMA5P40884 581 aa6.9□□□□□ -1.3
SOD2YHR008C CCT7P42943 550 aaKnown RBP6.9□□□□□ -1.3
SOD2YHR008C YNR062CP53748 327 aa6.9□□□□□ -1.3
SOD2YHR008C SSK1Q07084 712 aa6.9□□□□□ -1.3
SOD2YHR008C MIM1Q08176 113 aa6.9□□□□□ -1.3
SOD2YHR008C SRL1Q08673 210 aa6.9□□□□□ -1.3
SOD2YHR008C APC2Q12440 853 aa6.9□□□□□ -1.3
SOD2YHR008C TIM9O74700 87 aa6.89□□□□□ -1.31
SOD2YHR008C YMR085WP0CF18 432 aa6.89□□□□□ -1.31
SOD2YHR008C POL4P25615 582 aa6.89□□□□□ -1.31
SOD2YHR008C YCR051WP25631 222 aa6.89□□□□□ -1.31
SOD2YHR008C GPI18P38211 433 aa6.89□□□□□ -1.31
SOD2YHR008C CTR2P38865 189 aa6.89□□□□□ -1.31
SOD2YHR008C AGE2P40529 298 aa6.89□□□□□ -1.31
SOD2YHR008C TAX4P47030 604 aa6.89□□□□□ -1.31
SOD2YHR008C GEP7P53171 287 aa6.89□□□□□ -1.31
SOD2YHR008C SYF2P53277 215 aaPredicted RBP6.89□□□□□ -1.31
SOD2YHR008C APJ1P53940 528 aa6.89□□□□□ -1.31
SOD2YHR008C AGE1Q04412 482 aa6.89□□□□□ -1.31
SOD2YHR008C THI72Q08579 599 aa6.89□□□□□ -1.31
SOD2YHR008C MCT1Q12283 360 aa6.89□□□□□ -1.31
SOD2YHR008C MET3P08536 511 aa6.88□□□□□ -1.31
SOD2YHR008C NIC96P34077 839 aa6.88□□□□□ -1.31
SOD2YHR008C FIG1P38224 298 aa6.88□□□□□ -1.31
SOD2YHR008C GCN20P43535 752 aaKnown RBP6.88□□□□□ -1.31
SOD2YHR008C DIA3P52290 468 aa6.88□□□□□ -1.31
SOD2YHR008C APM1Q00776 475 aaPredicted RBP6.88□□□□□ -1.31
SOD2YHR008C YKR011CQ02209 353 aa6.88□□□□□ -1.31
SOD2YHR008C YPR196WQ06595 470 aa6.88□□□□□ -1.31
SOD2YHR008C DIA2Q08496 732 aaPredicted RBP6.88□□□□□ -1.31
SOD2YHR008C RRS1Q08746 203 aaKnown RBP6.88□□□□□ -1.31
SOD2YHR008C ULA1Q12059 462 aa6.88□□□□□ -1.31
SOD2YHR008C YOL087CQ99247 1116 aa6.88□□□□□ -1.31
SOD2YHR008C PDE2P06776 526 aa6.87□□□□□ -1.31
SOD2YHR008C GCD1P09032 578 aaPredicted RBP6.87□□□□□ -1.31
SOD2YHR008C PRP4P20053 465 aaKnown RBP6.87□□□□□ -1.31
SOD2YHR008C RPC19P28000 142 aaKnown RBP6.87□□□□□ -1.31
SOD2YHR008C PAD1P33751 242 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SOD2YHR008C FAT1P38225 669 aa6.87□□□□□ -1.31
SOD2YHR008C ALP1P38971 573 aa6.87□□□□□ -1.31
SOD2YHR008C PSD1P39006 500 aa6.87□□□□□ -1.31
SOD2YHR008C IRC7P43623 340 aa6.87□□□□□ -1.31
SOD2YHR008C YJL055WP47044 245 aa6.87□□□□□ -1.31
SOD2YHR008C IMD4P50094 524 aaKnown RBP6.87□□□□□ -1.31
SOD2YHR008C RAD33Q04231 177 aa6.87□□□□□ -1.31
SOD2YHR008C VPS36Q06696 566 aa6.87□□□□□ -1.31
SOD2YHR008C NSL1Q12143 216 aa6.87□□□□□ -1.31
SOD2YHR008C RPL39P04650 51 aa6.86□□□□□ -1.31
SOD2YHR008C PFS2P42841 465 aaKnown RBP6.86□□□□□ -1.31
SOD2YHR008C BNA2P47125 453 aa6.86□□□□□ -1.31
SOD2YHR008C YNL181WP53878 407 aa6.86□□□□□ -1.31
SOD2YHR008C VPS71Q03433 280 aa6.86□□□□□ -1.31
SOD2YHR008C SNT309Q06091 175 aaPredicted RBP6.86□□□□□ -1.31
SOD2YHR008C HRT1Q08273 121 aa6.86□□□□□ -1.31
SOD2YHR008C USB1Q12208 290 aaKnown RBP6.86□□□□□ -1.31
SOD2YHR008C ILV5P06168 395 aaKnown RBP6.85□□□□□ -1.31
SOD2YHR008C PET9P18239 318 aaKnown RBP6.85□□□□□ -1.31
SOD2YHR008C YCR100CP25606 316 aa6.85□□□□□ -1.31
SOD2YHR008C PPA2P28239 310 aa6.85□□□□□ -1.31
SOD2YHR008C IST2P38250 946 aa6.85□□□□□ -1.31
SOD2YHR008C YHR035WP38769 630 aa6.85□□□□□ -1.31
SOD2YHR008C RCY1P39531 840 aa6.85□□□□□ -1.31
SOD2YHR008C RBG1P39729 369 aa6.85□□□□□ -1.31
SOD2YHR008C YER184CP39961 794 aa6.85□□□□□ -1.31
SOD2YHR008C RNH202Q05635 350 aa6.85□□□□□ -1.31
SOD2YHR008C THP2O13539 261 aaKnown RBP6.84□□□□□ -1.31
SOD2YHR008C TPK2P06245 380 aa6.84□□□□□ -1.31
SOD2YHR008C IES6P32617 166 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms