RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MRPL40P36534 297 aa3.99□□□□□ -1.77
PRE9YGR135W YBR056WP38081 501 aa3.99□□□□□ -1.77
PRE9YGR135W PRM9P39551 298 aa3.99□□□□□ -1.77
PRE9YGR135W VAB2P40003 282 aa3.99□□□□□ -1.77
PRE9YGR135W ISC1P40015 477 aaKnown RBP3.99□□□□□ -1.77
PRE9YGR135W SPO73P40031 143 aa3.99□□□□□ -1.77
PRE9YGR135W ALD5P40047 520 aaKnown RBP3.99□□□□□ -1.77
PRE9YGR135W VRG4P40107 337 aa3.99□□□□□ -1.77
PRE9YGR135W MPM1P40364 252 aa3.99□□□□□ -1.77
PRE9YGR135W AYR1P40471 297 aa3.99□□□□□ -1.77
PRE9YGR135W YJL218WP40892 196 aaKnown RBP3.99□□□□□ -1.77
PRE9YGR135W YFL015CP43578 164 aa3.99□□□□□ -1.77
PRE9YGR135W PRM8P53174 237 aa3.99□□□□□ -1.77
PRE9YGR135W NQM1P53228 333 aaPredicted RBP3.99□□□□□ -1.77
PRE9YGR135W YGR126WP53274 230 aa3.99□□□□□ -1.77
PRE9YGR135W MKC7P53379 596 aa3.99□□□□□ -1.77
PRE9YGR135W SPP2Q02521 185 aa3.99□□□□□ -1.77
PRE9YGR135W MRPS16Q02608 121 aa3.99□□□□□ -1.77
PRE9YGR135W YPL068CQ02749 293 aa3.99□□□□□ -1.77
PRE9YGR135W RRN5Q02983 363 aa3.99□□□□□ -1.77
PRE9YGR135W YMR178WQ03219 274 aaKnown RBP3.99□□□□□ -1.77
PRE9YGR135W GOT1Q03554 138 aa3.99□□□□□ -1.77
PRE9YGR135W YDR249CQ03787 373 aa3.99□□□□□ -1.77
PRE9YGR135W DXO1Q06349 442 aa3.99□□□□□ -1.77
PRE9YGR135W YFH1Q07540 174 aa3.99□□□□□ -1.77
PRE9YGR135W MFG1Q07684 458 aa3.99□□□□□ -1.77
PRE9YGR135W IRC10Q08118 586 aa3.99□□□□□ -1.77
PRE9YGR135W THP1Q08231 455 aa3.99□□□□□ -1.77
PRE9YGR135W FEX1Q08913 375 aa3.99□□□□□ -1.77
PRE9YGR135W LAG2Q92325 660 aa3.99□□□□□ -1.77
PRE9YGR135W MOT1P32333 1867 aa3.98□□□□□ -1.77
PRE9YGR135W STE3P06783 470 aa3.98□□□□□ -1.77
PRE9YGR135W CBP1P07252 654 aa3.98□□□□□ -1.77
PRE9YGR135W GAL3P13045 520 aa3.98□□□□□ -1.77
PRE9YGR135W ARO3P14843 370 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W CNB1P25296 175 aa3.98□□□□□ -1.77
PRE9YGR135W TAH1P25638 111 aaPredicted RBP3.98□□□□□ -1.77
PRE9YGR135W CAM1P29547 415 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W RNP1P32385 249 aa3.98□□□□□ -1.77
PRE9YGR135W HYM1P32464 399 aa3.98□□□□□ -1.77
PRE9YGR135W RPS1AP33442 255 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W MBB1P39534 108 aa3.98□□□□□ -1.77
PRE9YGR135W HXT9P40885 567 aa3.98□□□□□ -1.77
PRE9YGR135W GAB1P41733 394 aa3.98□□□□□ -1.77
PRE9YGR135W ATG27P46989 271 aa3.98□□□□□ -1.77
PRE9YGR135W AIM22P47051 409 aa3.98□□□□□ -1.77
PRE9YGR135W ECM27P47144 725 aa3.98□□□□□ -1.77
PRE9YGR135W GTO1P48239 356 aa3.98□□□□□ -1.77
PRE9YGR135W YIP5P53108 310 aa3.98□□□□□ -1.77
PRE9YGR135W RMD9P53140 646 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W FMP48P53233 369 aa3.98□□□□□ -1.77
PRE9YGR135W PRM1P53835 661 aa3.98□□□□□ -1.77
PRE9YGR135W DUG3P53871 357 aa3.98□□□□□ -1.77
PRE9YGR135W OCA2P53949 197 aa3.98□□□□□ -1.77
PRE9YGR135W YVH1Q02256 364 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W TRM44Q02648 567 aaKnown RBP3.98□□□□□ -1.77
PRE9YGR135W PET117Q02771 107 aa3.98□□□□□ -1.77
PRE9YGR135W MSC1Q03104 513 aa3.98□□□□□ -1.77
PRE9YGR135W NHP10Q03435 203 aa3.98□□□□□ -1.77
PRE9YGR135W SCS7Q03529 384 aa3.98□□□□□ -1.77
PRE9YGR135W YMR010WQ03687 405 aa3.98□□□□□ -1.77
PRE9YGR135W YMD8Q03697 442 aa3.98□□□□□ -1.77
PRE9YGR135W ECM11Q04110 302 aa3.98□□□□□ -1.77
PRE9YGR135W YMR321CQ04898 105 aa3.98□□□□□ -1.77
PRE9YGR135W PDR8Q06149 701 aa3.98□□□□□ -1.77
PRE9YGR135W SWC7Q06707 132 aa3.98□□□□□ -1.77
PRE9YGR135W YOL131WQ08270 108 aa3.98□□□□□ -1.77
PRE9YGR135W FEX2Q08991 375 aa3.98□□□□□ -1.77
PRE9YGR135W YOL107WQ12239 342 aa3.98□□□□□ -1.77
PRE9YGR135W SNU23Q12368 194 aaPredicted RBP3.98□□□□□ -1.77
PRE9YGR135W APC2Q12440 853 aa3.98□□□□□ -1.77
PRE9YGR135W GSC2P40989 1895 aa3.98□□□□□ -1.77
PRE9YGR135W ADE4P04046 510 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W CHO1P08456 276 aa3.97□□□□□ -1.77
PRE9YGR135W BAR1P12630 587 aa3.97□□□□□ -1.77
PRE9YGR135W AMD1P15274 810 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W IDP1P21954 428 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W FAA1P30624 700 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W SSO1P32867 290 aa3.97□□□□□ -1.77
PRE9YGR135W CBT1P36038 271 aaPredicted RBP3.97□□□□□ -1.77
PRE9YGR135W MRPL3P36516 390 aa3.97□□□□□ -1.77
PRE9YGR135W ARP1P38696 384 aa3.97□□□□□ -1.77
PRE9YGR135W STP2P38704 541 aa3.97□□□□□ -1.77
PRE9YGR135W VHS2P40463 436 aa3.97□□□□□ -1.77
PRE9YGR135W TIR3P40552 269 aa3.97□□□□□ -1.77
PRE9YGR135W PHB1P40961 287 aa3.97□□□□□ -1.77
PRE9YGR135W RPA34P47006 233 aaPredicted RBP3.97□□□□□ -1.77
PRE9YGR135W MDV1P47025 714 aa3.97□□□□□ -1.77
PRE9YGR135W UBC12P52491 188 aa3.97□□□□□ -1.77
PRE9YGR135W NBP35P52920 328 aa3.97□□□□□ -1.77
PRE9YGR135W MPC1P53157 130 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W TIM13P53299 105 aa3.97□□□□□ -1.77
PRE9YGR135W CAF40P53829 373 aa3.97□□□□□ -1.77
PRE9YGR135W IGO1P53897 168 aa3.97□□□□□ -1.77
PRE9YGR135W NUP100Q02629 959 aa3.97□□□□□ -1.77
PRE9YGR135W NUP116Q02630 1113 aa3.97□□□□□ -1.77
PRE9YGR135W YML122CQ03207 126 aa3.97□□□□□ -1.77
PRE9YGR135W CWC21Q03375 135 aaKnown RBP3.97□□□□□ -1.77
PRE9YGR135W YLR283WQ05867 314 aa3.97□□□□□ -1.77
PRE9YGR135W GRX8Q05926 109 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms