RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	YRA1	Q12159	226 aa	Known RBP	5.78	□□□□□ -1.48
BUD9	YGR041W	RIO1	Q12196	484 aa	Known RBP	5.78	□□□□□ -1.48
BUD9	YGR041W	FLO1	P32768	1537 aa		5.78	□□□□□ -1.48
BUD9	YGR041W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.48	not detected
BUD9	YGR041W	RPL27A	P0C2H6	136 aa	Known RBP	5.77	□□□□□ -1.48
BUD9	YGR041W	RPL27B	P0C2H7	136 aa	Known RBP	5.77	□□□□□ -1.48
BUD9	YGR041W	ITR2	P30606	609 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	NUP2	P32499	720 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	MCR1	P36060	302 aa	Known RBP	5.77	□□□□□ -1.48
BUD9	YGR041W	UBP5	P39944	805 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	RIO2	P40160	425 aa	Known RBP	5.77	□□□□□ -1.48
BUD9	YGR041W	KIN4	Q01919	800 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	OST6	Q03723	332 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	FUS2	Q05670	677 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	DCR2	Q05924	578 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	YLR111W	Q12528	110 aa		5.77	□□□□□ -1.48
BUD9	YGR041W	HIS1	P00498	297 aa	Known RBP	5.77	□□□□□ -1.49
BUD9	YGR041W	YCR100C	P25606	316 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	UBC6	P33296	250 aa	Predicted RBP	5.77	□□□□□ -1.49
BUD9	YGR041W	LEU5	P38702	357 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	SAD1	P43589	448 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	KEG1	P43614	200 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	RTT101	P47050	842 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	STB4	P50104	949 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	CAF40	P53829	373 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	YNL234W	P53857	426 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	CSM3	Q04659	317 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	ECI1	Q05871	280 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	THI20	Q08224	551 aa		5.77	□□□□□ -1.49
BUD9	YGR041W	TPT1	Q12272	230 aa	Known RBP	5.77	□□□□□ -1.49
BUD9	YGR041W	TEF1	P02994	458 aa	Known RBP	5.76	□□□□□ -1.49
BUD9	YGR041W	CTS1	P29029	562 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	MKK1	P32490	508 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	YEF1	P32622	495 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	ZRT1	P32804	376 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	PPZ2	P33329	710 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	LOS1	P33418	1100 aa	Predicted RBP	5.76	□□□□□ -1.49
BUD9	YGR041W	THI80	P35202	319 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	CBT1	P36038	271 aa	Predicted RBP	5.76	□□□□□ -1.49
BUD9	YGR041W	DTR1	P38125	572 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	MIC12	P38341	106 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	RTC3	P38804	111 aa	Predicted RBP	5.76	□□□□□ -1.49
BUD9	YGR041W	SDS3	P40505	327 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	YNL320W	P42840	284 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	SAM50	P53969	484 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	YPL077C	Q02831	240 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	LOT6	Q07923	191 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	YBL111C	Q3E7Y5	667 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	AI5_BETA	Q9ZZX0	354 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	HKR1	P41809	1802 aa		5.76	□□□□□ -1.49
BUD9	YGR041W	ATP7	P30902	174 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	IES6	P32617	166 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	PAC2	P39937	518 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	DDI1	P40087	428 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	IRC7	P43623	340 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	RPC17	P47076	161 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	IRC15	Q02733	499 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	ODC1	Q03028	310 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	DIG1	Q03063	452 aa	Known RBP	5.75	□□□□□ -1.49
BUD9	YGR041W	TAF10	Q12030	206 aa		5.75	□□□□□ -1.49
BUD9	YGR041W	DET1	Q99288	334 aa	Known RBP	5.75	□□□□□ -1.49
BUD9	YGR041W	RPN13	O13563	156 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	PGK1	P00560	416 aa	Known RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	ILV1	P00927	576 aa	Known RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	CBF1	P17106	351 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	ECM15	P35195	104 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	RCK2	P38623	610 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	YHR035W	P38769	630 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	THO1	P40040	218 aa	Known RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	YCH1	P42937	148 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	VPS25	P47142	202 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	MRPL51	Q06090	140 aa	Predicted RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	ASR1	Q06834	288 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	GAT3	Q07928	141 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	YOR387C	Q08910	206 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	YLR108C	Q12259	485 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	SNF8	Q12483	233 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	ILV6	P25605	309 aa	Known RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	TIP1	P27654	210 aa	Predicted RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	SPC34	P36131	295 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	GEP4	P38812	185 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	ERG28	P40030	148 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	SMX2	P40204	77 aa	Known RBP	5.74	□□□□□ -1.49
BUD9	YGR041W	YFL040W	P43562	540 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	TAD2	P47058	250 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	ABM1	P47146	123 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	STP1	Q00947	519 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	VPS74	Q06385	345 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	TIM18	Q08749	192 aa		5.74	□□□□□ -1.49
BUD9	YGR041W	PMD1	P32634	1753 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	SSC1	P0CS90	654 aa	Known RBP	5.73	□□□□□ -1.49
BUD9	YGR041W	PTP1	P25044	335 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	PEX3	P28795	441 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	MUD1	P32605	298 aa	Known RBP	5.73	□□□□□ -1.49
BUD9	YGR041W	GPX2	P38143	162 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	YIL001W	P40560	513 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	ILM1	P47155	203 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	SPC24	Q04477	213 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	YDR222W	Q04925	415 aa		5.73	□□□□□ -1.49
BUD9	YGR041W	TAF9	Q05027	157 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms