RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	AUS1	Q08409	1394 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	SPS100	P13130	326 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	FUS3	P16892	353 aa	Known RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	COX10	P21592	462 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	RPB9	P27999	122 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	ITR2	P30606	609 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	MEI5	P32489	222 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	AGA2	P32781	87 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	KTI12	P34253	313 aa	Known RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	PRY2	P36110	329 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	RFT1	P38206	574 aa	Predicted RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	SWC5	P38326	303 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	PET8	P38921	284 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	POP2	P39008	433 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	FRT2	P39734	528 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	DSE1	P40077	573 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	OSW5	P40219	148 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	UTP25	P40498	721 aa	Known RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	NRM1	P53718	249 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	DBP6	P53734	629 aa	Known RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	SMD1	Q02260	146 aa	Predicted RBP	1.08	□□□□□ -2.24
SCW11	YGL028C	INP2	Q03824	705 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	YMR244W	Q04018	355 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	YLR297W	Q05899	129 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	CUR1	Q06469	252 aa		1.08	□□□□□ -2.24
SCW11	YGL028C	YHR035W	P38769	630 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	TRR2	P38816	342 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	FET3	P38993	636 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	SOP4	P39543	234 aa	Predicted RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	PES4	P39684	611 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	BDH1	P39714	382 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	CPR7	P47103	393 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	FMP48	P53233	369 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	ZRG17	P53735	605 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	YNR066C	P53752	436 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	ACT1	P60010	375 aa	Known RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	YPL080C	Q02826	108 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	IRC4	Q03036	179 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	INP1	Q03694	420 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	GMC1	Q04399	608 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	VAC14	Q06708	880 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	DTD1	Q07648	150 aa	Known RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	YPL245W	Q12179	454 aa	Known RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	TRM10	Q12400	293 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	FLO11	P08640	1367 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	GCD2	P12754	651 aa	Predicted RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	ZIP1	P31111	875 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	VPH2	P32341	215 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	ZRT3	P34240	503 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	GPX1	P36014	167 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	MCH2	P36032	473 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	YMR262W	P38430	313 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	CTM1	P38818	585 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	END3	P39013	349 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	MNN9	P39107	395 aa	Known RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	SLM1	P40485	686 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	COS4	P43542	379 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	MIC19	P43594	170 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	LOH1	P47055	219 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	BIO4	P53630	237 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	SNX41	Q04053	625 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	UTP15	Q04305	513 aa	Known RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	VTI1	Q04338	217 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	MRX8	Q05473	314 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	RRG8	Q06109	277 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	APC9	Q12107	265 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	YDL211C	Q12121	372 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	APC2	Q12440	853 aa		1.07	□□□□□ -2.24
SCW11	YGL028C	PFK27	Q12471	397 aa	Predicted RBP	1.07	□□□□□ -2.24
SCW11	YGL028C	STF1	P01098	86 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	CAR2	P07991	424 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	RPL31A	P0C2H8	113 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	CPT1	P17898	393 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	DBP3	P20447	523 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	MRPL20	P22354	195 aa	Predicted RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	RPL5	P26321	297 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	YPC1	P38298	316 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	RRF1	P38771	230 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	VPS45	P38932	577 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	GDS1	P41913	522 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	MPP10	P47083	593 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	UBC13	P52490	153 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	YMR111C	Q04461	462 aa	Predicted RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	SEC13	Q04491	297 aa	Known RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	ECM18	Q04623	453 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	YOR292C	Q08743	309 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	MDY2	Q12285	212 aa		1.06	□□□□□ -2.24
SCW11	YGL028C	DCP1	Q12517	231 aa	Predicted RBP	1.06	□□□□□ -2.24
SCW11	YGL028C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
SCW11	YGL028C	CUP2	P15315	225 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	HPR1	P17629	752 aa	Known RBP	1.05	□□□□□ -2.24
SCW11	YGL028C	ZRT1	P32804	376 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	IMP3	P32899	183 aa	Predicted RBP	1.05	□□□□□ -2.24
SCW11	YGL028C	SKG6	P32900	734 aa	Predicted RBP	1.05	□□□□□ -2.24
SCW11	YGL028C	YBR062C	P38239	180 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	SPO73	P40031	143 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	YIR035C	P40579	254 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	HIT1	P46973	164 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	VOA1	P53262	265 aa		1.05	□□□□□ -2.24
SCW11	YGL028C	SPO19	Q03029	223 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms