RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W CRT10Q08226 957 aa3.52□□□□□ -1.85
CHD1YER164W NBA1Q08229 501 aaKnown RBP3.52□□□□□ -1.85
CHD1YER164W RRP40Q08285 240 aaKnown RBP3.52□□□□□ -1.85
CHD1YER164W JLP1Q12358 412 aa3.52□□□□□ -1.85
CHD1YER164W EAF3Q12432 401 aa3.52□□□□□ -1.85
CHD1YER164W HXK2P04807 486 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W NAR1P23503 491 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W YIM1P28625 365 aa3.51□□□□□ -1.85
CHD1YER164W PRE4P30657 266 aa3.51□□□□□ -1.85
CHD1YER164W CAT2P32796 670 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W SGE1P33335 543 aa3.51□□□□□ -1.85
CHD1YER164W SUR2P38992 349 aa3.51□□□□□ -1.85
CHD1YER164W FMP52P40008 231 aa3.51□□□□□ -1.85
CHD1YER164W RPL13BP40212 199 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W YIR035CP40579 254 aa3.51□□□□□ -1.85
CHD1YER164W GNA1P43577 159 aaPredicted RBP3.51□□□□□ -1.85
CHD1YER164W MRX6P48564 524 aa3.51□□□□□ -1.85
CHD1YER164W MIC26P50087 233 aa3.51□□□□□ -1.85
CHD1YER164W ERV29P53337 310 aa3.51□□□□□ -1.85
CHD1YER164W MRPL22P53881 309 aa3.51□□□□□ -1.85
CHD1YER164W CRR1Q05790 422 aa3.51□□□□□ -1.85
CHD1YER164W FCY22Q12119 530 aa3.51□□□□□ -1.85
CHD1YER164W SIA1Q12212 622 aa3.51□□□□□ -1.85
CHD1YER164W RPL13AQ12690 199 aaPredicted RBP3.51□□□□□ -1.85
CHD1YER164W PNO1Q99216 274 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W SED4P25365 1065 aa3.51□□□□□ -1.85
CHD1YER164W TRR1P29509 319 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W NRP1P32770 719 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
CHD1YER164W UBA4P38820 440 aa3.51□□□□□ -1.85
CHD1YER164W AIM10P39965 576 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W YEL073CP39974 107 aa3.51□□□□□ -1.85
CHD1YER164W GDS1P41913 522 aa3.51□□□□□ -1.85
CHD1YER164W PFS2P42841 465 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W HHO1P53551 258 aa3.51□□□□□ -1.85
CHD1YER164W ALG9P53868 555 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W RPL34AP87262 121 aaPredicted RBP3.51□□□□□ -1.85
CHD1YER164W YPL272CQ08984 517 aa3.51□□□□□ -1.85
CHD1YER164W TIR4Q12218 487 aaPredicted RBP3.51□□□□□ -1.85
CHD1YER164W SME1Q12330 94 aaPredicted RBP3.51□□□□□ -1.85
CHD1YER164W TMA7Q3E764 64 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W RPS31P05759 152 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W UBI4P0CG63 381 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W RPL40AP0CH08 128 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W RPL40BP0CH09 128 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W RPL3P14126 387 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W BOS1P25385 244 aa3.51□□□□□ -1.85
CHD1YER164W AFG1P32317 509 aa3.51□□□□□ -1.85
CHD1YER164W LIP5P32875 414 aa3.51□□□□□ -1.85
CHD1YER164W CBP4P37267 147 aa3.51□□□□□ -1.85
CHD1YER164W ECM31P38122 312 aa3.51□□□□□ -1.85
CHD1YER164W YMR262WP38430 313 aa3.51□□□□□ -1.85
CHD1YER164W PUG1P40100 303 aa3.51□□□□□ -1.85
CHD1YER164W IME4P41833 600 aa3.51□□□□□ -1.85
CHD1YER164W ASK10P48361 1146 aa3.51□□□□□ -1.85
CHD1YER164W RAD17P48581 401 aa3.51□□□□□ -1.85
CHD1YER164W NIT3P49954 291 aa3.51□□□□□ -1.85
CHD1YER164W YGL114WP53134 725 aa3.51□□□□□ -1.85
CHD1YER164W YDR366CP87287 132 aa3.51□□□□□ -1.85
CHD1YER164W CAB5Q03941 241 aa3.51□□□□□ -1.85
CHD1YER164W YHM2Q04013 314 aa3.51□□□□□ -1.85
CHD1YER164W VBA4Q04602 768 aaKnown RBP3.51□□□□□ -1.85
CHD1YER164W ARO10Q06408 635 aa3.51□□□□□ -1.85
CHD1YER164W CYK3Q07533 885 aa3.51□□□□□ -1.85
CHD1YER164W SPT3P06844 337 aa3.5□□□□□ -1.85
CHD1YER164W HNM1P19807 563 aa3.5□□□□□ -1.85
CHD1YER164W EXG1P23776 448 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W VMA16P23968 213 aa3.5□□□□□ -1.85
CHD1YER164W TIP1P27654 210 aaPredicted RBP3.5□□□□□ -1.85
CHD1YER164W GSH1P32477 678 aa3.5□□□□□ -1.85
CHD1YER164W PUB1P32588 453 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
CHD1YER164W SUR1P33300 382 aa3.5□□□□□ -1.85
CHD1YER164W YKL097CP34245 136 aa3.5□□□□□ -1.85
CHD1YER164W ELF1P36053 145 aa3.5□□□□□ -1.85
CHD1YER164W YKL077WP36081 392 aa3.5□□□□□ -1.85
CHD1YER164W SHE1P38200 338 aa3.5□□□□□ -1.85
CHD1YER164W LSM2P38203 95 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W MAD2P40958 196 aa3.5□□□□□ -1.85
CHD1YER164W YGL101WP53144 215 aa3.5□□□□□ -1.85
CHD1YER164W SPR6Q01684 191 aa3.5□□□□□ -1.85
CHD1YER164W YKR011CQ02209 353 aa3.5□□□□□ -1.85
CHD1YER164W YPL113CQ02961 396 aa3.5□□□□□ -1.85
CHD1YER164W DLT1Q04216 342 aa3.5□□□□□ -1.85
CHD1YER164W UTP15Q04305 513 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W YPR114WQ06107 315 aa3.5□□□□□ -1.85
CHD1YER164W WTM1Q12363 437 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W MHT1Q12525 324 aa3.5□□□□□ -1.85
CHD1YER164W YJR112W-AQ3E743 109 aa3.5□□□□□ -1.85
CHD1YER164W STF2P16965 84 aa3.5□□□□□ -1.85
CHD1YER164W LOT5P34234 306 aa3.5□□□□□ -1.85
CHD1YER164W SRY1P36007 326 aa3.5□□□□□ -1.85
CHD1YER164W AHP1P38013 176 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W STB5P38699 743 aa3.5□□□□□ -1.85
CHD1YER164W ASP1P38986 381 aaPredicted RBP3.5□□□□□ -1.85
CHD1YER164W CAT5P41735 233 aa3.5□□□□□ -1.85
CHD1YER164W FAA4P47912 694 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W VPS73P53142 486 aaKnown RBP3.5□□□□□ -1.85
CHD1YER164W KXD1P53158 218 aa3.5□□□□□ -1.85
CHD1YER164W YNL034WP53963 612 aa3.5□□□□□ -1.85
CHD1YER164W RSM10Q03201 203 aa3.5□□□□□ -1.85
CHD1YER164W YMR178WQ03219 274 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms