RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YCL002CP25565 263 aa7.06□□□□□ -1.28
PUP3YER094C MSN4P33749 630 aa7.06□□□□□ -1.28
PUP3YER094C MAL32P38158 584 aa7.06□□□□□ -1.28
PUP3YER094C YER010CP40011 234 aa7.06□□□□□ -1.28
PUP3YER094C YIL165CP40446 119 aa7.06□□□□□ -1.28
PUP3YER094C SDP1P40479 209 aa7.06□□□□□ -1.28
PUP3YER094C RPE1P46969 238 aa7.06□□□□□ -1.28
PUP3YER094C SFH5P47008 294 aa7.06□□□□□ -1.28
PUP3YER094C IKS1P47042 667 aa7.06□□□□□ -1.28
PUP3YER094C YGR054WP53235 642 aaKnown RBP7.06□□□□□ -1.28
PUP3YER094C MAL12P53341 584 aa7.06□□□□□ -1.28
PUP3YER094C NOG1Q02892 647 aaKnown RBP7.06□□□□□ -1.28
PUP3YER094C MIX14Q04341 121 aa7.06□□□□□ -1.28
PUP3YER094C UTP21Q06078 939 aaPredicted RBP7.06□□□□□ -1.28
PUP3YER094C TAZ1Q06510 381 aa7.06□□□□□ -1.28
PUP3YER094C IPK1Q06667 281 aa7.06□□□□□ -1.28
PUP3YER094C HNT3Q08702 217 aa7.06□□□□□ -1.28
PUP3YER094C RAX1Q08760 435 aa7.06□□□□□ -1.28
PUP3YER094C YRA1Q12159 226 aaKnown RBP7.06□□□□□ -1.28
PUP3YER094C MDM32Q12171 622 aa7.06□□□□□ -1.28
PUP3YER094C YOR032W-AQ8TGS1 66 aa7.06□□□□□ -1.28
PUP3YER094C PEP4P07267 405 aaKnown RBP7.05□□□□□ -1.28
PUP3YER094C GAS1P22146 559 aaKnown RBP7.05□□□□□ -1.28
PUP3YER094C YCR102CP25608 368 aa7.05□□□□□ -1.28
PUP3YER094C NUD1P32336 851 aa7.05□□□□□ -1.28
PUP3YER094C ZUO1P32527 433 aaKnown RBP7.05□□□□□ -1.28
PUP3YER094C PAD1P33751 242 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
PUP3YER094C SDS22P36047 338 aa7.05□□□□□ -1.28
PUP3YER094C DTR1P38125 572 aa7.05□□□□□ -1.28
PUP3YER094C GPX2P38143 162 aa7.05□□□□□ -1.28
PUP3YER094C VBA2P38358 474 aaKnown RBP7.05□□□□□ -1.28
PUP3YER094C PCL6P40038 420 aa7.05□□□□□ -1.28
PUP3YER094C HIS6P40545 261 aa7.05□□□□□ -1.28
PUP3YER094C BRR6P53062 197 aa7.05□□□□□ -1.28
PUP3YER094C YGR066CP53242 292 aa7.05□□□□□ -1.28
PUP3YER094C CIK1Q01649 594 aa7.05□□□□□ -1.28
PUP3YER094C NUP116Q02630 1113 aa7.05□□□□□ -1.28
PUP3YER094C GIS1Q03833 894 aa7.05□□□□□ -1.28
PUP3YER094C MRPL1Q04599 285 aa7.05□□□□□ -1.28
PUP3YER094C RRP9Q06506 573 aaKnown RBP7.05□□□□□ -1.28
PUP3YER094C YDL114WQ07530 308 aa7.05□□□□□ -1.28
PUP3YER094C FRE5Q08908 694 aa7.05□□□□□ -1.28
PUP3YER094C ACF2Q12168 779 aa7.05□□□□□ -1.28
PUP3YER094C MSH5Q12175 901 aa7.05□□□□□ -1.28
PUP3YER094C YOL114CQ12322 202 aa7.05□□□□□ -1.28
PUP3YER094C SET6Q12529 373 aa7.05□□□□□ -1.28
PUP3YER094C YGR161W-CQ3E744 92 aa7.05□□□□□ -1.28
PUP3YER094C EHD3P28817 500 aa7.04□□□□□ -1.28
PUP3YER094C PUB1P32588 453 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PUP3YER094C NPL6P32832 435 aa7.04□□□□□ -1.28
PUP3YER094C YKR073CP36153 106 aa7.04□□□□□ -1.28
PUP3YER094C APD1P38281 316 aa7.04□□□□□ -1.28
PUP3YER094C MLH1P38920 769 aa7.04□□□□□ -1.28
PUP3YER094C SHO1P40073 367 aa7.04□□□□□ -1.28
PUP3YER094C REE1P40893 198 aa7.04□□□□□ -1.28
PUP3YER094C ECO1P43605 281 aa7.04□□□□□ -1.28
PUP3YER094C NIT2P47016 307 aa7.04□□□□□ -1.28
PUP3YER094C PGU1P47180 361 aa7.04□□□□□ -1.28
PUP3YER094C ERF2Q06551 359 aa7.04□□□□□ -1.28
PUP3YER094C RDL2Q08742 149 aaKnown RBP7.04□□□□□ -1.28
PUP3YER094C SOG2Q08817 791 aa7.04□□□□□ -1.28
PUP3YER094C YOR378WQ08902 515 aa7.04□□□□□ -1.28
PUP3YER094C THP3Q12049 470 aaKnown RBP7.04□□□□□ -1.28
PUP3YER094C YRM1Q12340 786 aa7.04□□□□□ -1.28
PUP3YER094C SWM1Q12379 170 aa7.04□□□□□ -1.28
PUP3YER094C TY1A-NL1Q12391 440 aaKnown RBP7.04□□□□□ -1.28
PUP3YER094C YOR343CQ12484 108 aa7.04□□□□□ -1.28
PUP3YER094C MTR10Q99189 972 aa7.04□□□□□ -1.28
PUP3YER094C BLM10P43583 2143 aa7.04□□□□□ -1.28
PUP3YER094C YEL009C-AA0A023PZF2 135 aa7.03□□□□□ -1.28
PUP3YER094C YFR010W-AP0C5N0 62 aa7.03□□□□□ -1.28
PUP3YER094C NFT1P0CE68 1218 aa7.03□□□□□ -1.28
PUP3YER094C SCO1P23833 295 aa7.03□□□□□ -1.28
PUP3YER094C ERG8P24521 451 aa7.03□□□□□ -1.28
PUP3YER094C GIT1P25346 518 aa7.03□□□□□ -1.28
PUP3YER094C ECT1P33412 323 aa7.03□□□□□ -1.28
PUP3YER094C MTC2P34246 357 aa7.03□□□□□ -1.28
PUP3YER094C RSM22P36056 628 aa7.03□□□□□ -1.28
PUP3YER094C YBR063CP38083 404 aa7.03□□□□□ -1.28
PUP3YER094C SER3P40054 469 aa7.03□□□□□ -1.28
PUP3YER094C YAE1P47118 141 aaPredicted RBP7.03□□□□□ -1.28
PUP3YER094C BPL1P48445 690 aaPredicted RBP7.03□□□□□ -1.28
PUP3YER094C LYS5P50113 272 aa7.03□□□□□ -1.28
PUP3YER094C PPT1P53043 513 aa7.03□□□□□ -1.28
PUP3YER094C SCW11P53189 542 aa7.03□□□□□ -1.28
PUP3YER094C YGR126WP53274 230 aa7.03□□□□□ -1.28
PUP3YER094C MKC7P53379 596 aa7.03□□□□□ -1.28
PUP3YER094C CPR8P53728 308 aa7.03□□□□□ -1.28
PUP3YER094C YPL039WQ03080 316 aa7.03□□□□□ -1.28
PUP3YER094C YDR209CQ03480 137 aa7.03□□□□□ -1.28
PUP3YER094C YDR514CQ04408 483 aa7.03□□□□□ -1.28
PUP3YER094C AIM6Q07716 390 aa7.03□□□□□ -1.28
PUP3YER094C TOR1P35169 2470 aa7.03□□□□□ -1.28
PUP3YER094C SEC62P21825 274 aa7.02□□□□□ -1.29
PUP3YER094C CPR2P23285 205 aa7.02□□□□□ -1.29
PUP3YER094C PUT3P25502 979 aaPredicted RBP7.02□□□□□ -1.29
PUP3YER094C FUN19P28003 413 aaPredicted RBP7.02□□□□□ -1.29
PUP3YER094C FUN26P31381 517 aa7.02□□□□□ -1.29
PUP3YER094C KAE1P36132 386 aa7.02□□□□□ -1.29
PUP3YER094C THI2P38141 450 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms