RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W SSO1P32867 290 aa3.83□□□□□ -1.8
TPA1YER049W SRO77P38163 1010 aa3.83□□□□□ -1.8
TPA1YER049W LRP1P38801 184 aaKnown RBP3.83□□□□□ -1.8
TPA1YER049W YPT35P38815 214 aaKnown RBP3.83□□□□□ -1.8
TPA1YER049W LSM12P38828 187 aaKnown RBP3.83□□□□□ -1.8
TPA1YER049W FET3P38993 636 aa3.83□□□□□ -1.8
TPA1YER049W NAB3P38996 802 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
TPA1YER049W RTT105P40063 208 aa3.83□□□□□ -1.8
TPA1YER049W PKP1P40530 394 aa3.83□□□□□ -1.8
TPA1YER049W MNT4P53745 580 aa3.83□□□□□ -1.8
TPA1YER049W RPL6AQ02326 176 aaKnown RBP3.83□□□□□ -1.8
TPA1YER049W PLM2Q04383 521 aa3.83□□□□□ -1.8
TPA1YER049W GAD1Q04792 585 aa3.83□□□□□ -1.8
TPA1YER049W PDR8Q06149 701 aa3.83□□□□□ -1.8
TPA1YER049W ATG41Q12048 136 aa3.83□□□□□ -1.8
TPA1YER049W APC2Q12440 853 aa3.83□□□□□ -1.8
TPA1YER049W LAS17Q12446 633 aa3.83□□□□□ -1.8
TPA1YER049W SKM1Q12469 655 aa3.83□□□□□ -1.8
TPA1YER049W YOL163WP0CF20 169 aa3.82□□□□□ -1.8
TPA1YER049W MRP2P10663 115 aaPredicted RBP3.82□□□□□ -1.8
TPA1YER049W STE12P13574 688 aa3.82□□□□□ -1.8
TPA1YER049W CDC26P14724 124 aa3.82□□□□□ -1.8
TPA1YER049W ERD2P18414 219 aa3.82□□□□□ -1.8
TPA1YER049W SNF6P18888 332 aa3.82□□□□□ -1.8
TPA1YER049W HOP1P20050 605 aa3.82□□□□□ -1.8
TPA1YER049W RPA135P22138 1203 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W YSR3P23501 404 aa3.82□□□□□ -1.8
TPA1YER049W IMG2P25642 146 aaPredicted RBP3.82□□□□□ -1.8
TPA1YER049W ECM31P38122 312 aa3.82□□□□□ -1.8
TPA1YER049W IML3P38265 245 aa3.82□□□□□ -1.8
TPA1YER049W GRE3P38715 327 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
TPA1YER049W ALP1P38971 573 aa3.82□□□□□ -1.8
TPA1YER049W FAU1P40099 211 aa3.82□□□□□ -1.8
TPA1YER049W FMC1P40491 155 aa3.82□□□□□ -1.8
TPA1YER049W TIR3P40552 269 aa3.82□□□□□ -1.8
TPA1YER049W CIN1P40987 1014 aa3.82□□□□□ -1.8
TPA1YER049W POP1P41812 875 aa3.82□□□□□ -1.8
TPA1YER049W YFR020WP43600 232 aa3.82□□□□□ -1.8
TPA1YER049W MTL1P53214 551 aa3.82□□□□□ -1.8
TPA1YER049W MEP3P53390 489 aa3.82□□□□□ -1.8
TPA1YER049W CSL4P53859 292 aaPredicted RBP3.82□□□□□ -1.8
TPA1YER049W RSM28Q03430 361 aa3.82□□□□□ -1.8
TPA1YER049W RSF1Q05043 376 aa3.82□□□□□ -1.8
TPA1YER049W BOP2Q06150 570 aa3.82□□□□□ -1.8
TPA1YER049W DCS1Q06151 350 aa3.82□□□□□ -1.8
TPA1YER049W IPK1Q06667 281 aa3.82□□□□□ -1.8
TPA1YER049W DCI1Q08558 271 aa3.82□□□□□ -1.8
TPA1YER049W PER33Q12144 273 aa3.82□□□□□ -1.8
TPA1YER049W RKM5Q12367 367 aa3.82□□□□□ -1.8
TPA1YER049W PCL9Q12477 304 aa3.82□□□□□ -1.8
TPA1YER049W IPP1P00817 287 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W ZWF1P11412 505 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W SEC12P11655 471 aa3.82□□□□□ -1.8
TPA1YER049W PRP28P23394 588 aa3.82□□□□□ -1.8
TPA1YER049W EXG1P23776 448 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W PEX1P24004 1043 aa3.82□□□□□ -1.8
TPA1YER049W RFA2P26754 273 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W ACB1P31787 87 aa3.82□□□□□ -1.8
TPA1YER049W KKQ8P36004 724 aa3.82□□□□□ -1.8
TPA1YER049W SDS22P36047 338 aa3.82□□□□□ -1.8
TPA1YER049W SHE2P36068 246 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
TPA1YER049W RPP1P38786 293 aa3.82□□□□□ -1.8
TPA1YER049W PTH1P38876 190 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W YER184CP39961 794 aa3.82□□□□□ -1.8
TPA1YER049W YEL068CP39977 110 aa3.82□□□□□ -1.8
TPA1YER049W FMP52P40008 231 aa3.82□□□□□ -1.8
TPA1YER049W YJL068CP40363 299 aa3.82□□□□□ -1.8
TPA1YER049W BAP3P41815 604 aa3.82□□□□□ -1.8
TPA1YER049W BNA6P43619 295 aa3.82□□□□□ -1.8
TPA1YER049W RPS12P48589 143 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W NUP57P48837 541 aa3.82□□□□□ -1.8
TPA1YER049W COS10P52924 374 aa3.82□□□□□ -1.8
TPA1YER049W SWC4P53201 476 aa3.82□□□□□ -1.8
TPA1YER049W COS1P53822 381 aa3.82□□□□□ -1.8
TPA1YER049W ARG5,6Q01217 863 aa3.82□□□□□ -1.8
TPA1YER049W ARX1Q03862 593 aaKnown RBP3.82□□□□□ -1.8
TPA1YER049W YGL194C-AQ2V2P6 80 aa3.82□□□□□ -1.8
TPA1YER049W DPM1P14020 267 aaKnown RBP3.81□□□□□ -1.8
TPA1YER049W HCM1P25364 564 aa3.81□□□□□ -1.8
TPA1YER049W SFC1P33303 322 aa3.81□□□□□ -1.8
TPA1YER049W TUL1P36096 758 aa3.81□□□□□ -1.8
TPA1YER049W GMH1P36125 273 aa3.81□□□□□ -1.8
TPA1YER049W HTD2P38790 280 aaKnown RBP3.81□□□□□ -1.8
TPA1YER049W HEM14P40012 539 aa3.81□□□□□ -1.8
TPA1YER049W YMR144WP40214 342 aaKnown RBP3.81□□□□□ -1.8
TPA1YER049W LYS12P40495 371 aaKnown RBP3.81□□□□□ -1.8
TPA1YER049W MET28P40573 187 aa3.81□□□□□ -1.8
TPA1YER049W PRM10P42946 383 aa3.81□□□□□ -1.8
TPA1YER049W DPB11P47027 764 aaPredicted RBP3.81□□□□□ -1.8
TPA1YER049W BAT2P47176 376 aaKnown RBP3.81□□□□□ -1.8
TPA1YER049W PMT5P52867 743 aa3.81□□□□□ -1.8
TPA1YER049W HOS2P53096 452 aaPredicted RBP3.81□□□□□ -1.8
TPA1YER049W ROG1P53118 685 aa3.81□□□□□ -1.8
TPA1YER049W PAU12P53343 120 aa3.81□□□□□ -1.8
TPA1YER049W MTQ1P53944 314 aa3.81□□□□□ -1.8
TPA1YER049W YMR310CQ04867 317 aaPredicted RBP3.81□□□□□ -1.8
TPA1YER049W TMA10Q06177 86 aa3.81□□□□□ -1.8
TPA1YER049W YOR289WQ12012 251 aaPredicted RBP3.81□□□□□ -1.8
TPA1YER049W FRE6Q12473 712 aa3.81□□□□□ -1.8
TPA1YER049W YLR099W-AQ3E798 87 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms