RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C NAS2P40555 220 aa9.76□□□□□ -0.85
SPC25YER018C REE1P40893 198 aa9.76□□□□□ -0.85
SPC25YER018C SFH5P47008 294 aa9.76□□□□□ -0.85
SPC25YER018C NIT2P47016 307 aa9.76□□□□□ -0.85
SPC25YER018C BRR6P53062 197 aa9.76□□□□□ -0.85
SPC25YER018C MPP6P53725 186 aaPredicted RBP9.76□□□□□ -0.85
SPC25YER018C YPR109WQ06104 294 aa9.76□□□□□ -0.85
SPC25YER018C TAZ1Q06510 381 aa9.76□□□□□ -0.85
SPC25YER018C MCM21Q06675 368 aa9.76□□□□□ -0.85
SPC25YER018C YOL024WQ08172 172 aa9.76□□□□□ -0.85
SPC25YER018C RDL2Q08742 149 aaKnown RBP9.76□□□□□ -0.85
SPC25YER018C KIN28P06242 306 aa9.75□□□□□ -0.85
SPC25YER018C YFR010W-AP0C5N0 62 aa9.75□□□□□ -0.85
SPC25YER018C YCL002CP25565 263 aa9.75□□□□□ -0.85
SPC25YER018C PDR3P33200 976 aa9.75□□□□□ -0.85
SPC25YER018C YGR066CP53242 292 aa9.75□□□□□ -0.85
SPC25YER018C HOL1P53389 586 aa9.75□□□□□ -0.85
SPC25YER018C MGR3Q04472 501 aa9.75□□□□□ -0.85
SPC25YER018C YLR173WQ06247 608 aa9.75□□□□□ -0.85
SPC25YER018C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
SPC25YER018C IES3Q12345 250 aa9.75□□□□□ -0.85
SPC25YER018C YOR343CQ12484 108 aa9.75□□□□□ -0.85
SPC25YER018C SET6Q12529 373 aa9.75□□□□□ -0.85
SPC25YER018C MTR10Q99189 972 aa9.75□□□□□ -0.85
SPC25YER018C CTA1P15202 515 aa9.74□□□□□ -0.85
SPC25YER018C ARO7P32178 256 aa9.74□□□□□ -0.85
SPC25YER018C CHK1P38147 527 aa9.74□□□□□ -0.85
SPC25YER018C MAL32P38158 584 aa9.74□□□□□ -0.85
SPC25YER018C VBA2P38358 474 aaKnown RBP9.74□□□□□ -0.85
SPC25YER018C YIL165CP40446 119 aa9.74□□□□□ -0.85
SPC25YER018C SDP1P40479 209 aa9.74□□□□□ -0.85
SPC25YER018C SEC24P40482 926 aaKnown RBP9.74□□□□□ -0.85
SPC25YER018C HIS6P40545 261 aa9.74□□□□□ -0.85
SPC25YER018C LYS5P50113 272 aa9.74□□□□□ -0.85
SPC25YER018C VOA1P53262 265 aa9.74□□□□□ -0.85
SPC25YER018C MAL12P53341 584 aa9.74□□□□□ -0.85
SPC25YER018C SDC1Q03323 175 aa9.74□□□□□ -0.85
SPC25YER018C MRPL1Q04599 285 aa9.74□□□□□ -0.85
SPC25YER018C MDM36Q06820 579 aa9.74□□□□□ -0.85
SPC25YER018C YGR161W-CQ3E744 92 aa9.74□□□□□ -0.85
SPC25YER018C TEL1P38110 2787 aa9.74□□□□□ -0.85
SPC25YER018C YAL064W-BO13512 126 aa9.73□□□□□ -0.85
SPC25YER018C PEP4P07267 405 aaKnown RBP9.73□□□□□ -0.85
SPC25YER018C SEC12P11655 471 aa9.73□□□□□ -0.85
SPC25YER018C RPL24BP24000 155 aaKnown RBP9.73□□□□□ -0.85
SPC25YER018C PAD1P33751 242 aaKnown RBP RIP-Chip data9.73□□□□□ -0.85not detected
SPC25YER018C NVJ1P38881 321 aa9.73□□□□□ -0.85
SPC25YER018C PHB1P40961 287 aa9.73□□□□□ -0.85
SPC25YER018C YGR126WP53274 230 aa9.73□□□□□ -0.85
SPC25YER018C ATG4P53867 494 aa9.73□□□□□ -0.85
SPC25YER018C NUP116Q02630 1113 aa9.73□□□□□ -0.85
SPC25YER018C YPL039WQ03080 316 aa9.73□□□□□ -0.85
SPC25YER018C SCS7Q03529 384 aa9.73□□□□□ -0.85
SPC25YER018C FMP42Q04991 504 aa9.73□□□□□ -0.85
SPC25YER018C YOR238WQ08634 303 aa9.73□□□□□ -0.85
SPC25YER018C FRE5Q08908 694 aa9.73□□□□□ -0.85
SPC25YER018C YGL041W-AP0C5N3 154 aa9.72□□□□□ -0.85
SPC25YER018C NFT1P0CE68 1218 aa9.72□□□□□ -0.85
SPC25YER018C CPR2P23285 205 aa9.72□□□□□ -0.85
SPC25YER018C SCO1P23833 295 aa9.72□□□□□ -0.85
SPC25YER018C SBA1P28707 216 aaKnown RBP9.72□□□□□ -0.85
SPC25YER018C UTP11P34247 250 aaPredicted RBP9.72□□□□□ -0.85
SPC25YER018C PBP1P53297 722 aaKnown RBP9.72□□□□□ -0.85
SPC25YER018C FDC1Q03034 503 aa9.72□□□□□ -0.85
SPC25YER018C SRL4Q03085 281 aa9.72□□□□□ -0.85
SPC25YER018C THP3Q12049 470 aaKnown RBP9.72□□□□□ -0.85
SPC25YER018C CYT1P07143 309 aa9.71□□□□□ -0.86
SPC25YER018C PDX1P16451 410 aa9.71□□□□□ -0.86
SPC25YER018C RPB10P22139 70 aa9.71□□□□□ -0.86
SPC25YER018C CLB2P24869 491 aa9.71□□□□□ -0.86
SPC25YER018C SDS22P36047 338 aa9.71□□□□□ -0.86
SPC25YER018C YPK3P38070 525 aa9.71□□□□□ -0.86
SPC25YER018C DTR1P38125 572 aa9.71□□□□□ -0.86
SPC25YER018C MLH1P38920 769 aa9.71□□□□□ -0.86
SPC25YER018C PFS2P42841 465 aaKnown RBP9.71□□□□□ -0.86
SPC25YER018C GAL83Q04739 417 aa9.71□□□□□ -0.86
SPC25YER018C RRP9Q06506 573 aaKnown RBP9.71□□□□□ -0.86
SPC25YER018C IPK1Q06667 281 aa9.71□□□□□ -0.86
SPC25YER018C YOR378WQ08902 515 aa9.71□□□□□ -0.86
SPC25YER018C YDL176WQ12027 708 aa9.71□□□□□ -0.86
SPC25YER018C REP1P03871 373 aa9.7□□□□□ -0.86
SPC25YER018C ECT1P33412 323 aa9.7□□□□□ -0.86
SPC25YER018C MOH1P38191 138 aa9.7□□□□□ -0.86
SPC25YER018C RPS26AP39938 119 aaKnown RBP9.7□□□□□ -0.86
SPC25YER018C RPS26BP39939 119 aaKnown RBP9.7□□□□□ -0.86
SPC25YER018C JLP2P40206 208 aa9.7□□□□□ -0.86
SPC25YER018C SUR7P54003 302 aa9.7□□□□□ -0.86
SPC25YER018C GRX3Q03835 250 aa9.7□□□□□ -0.86
SPC25YER018C RRP17Q04031 235 aaPredicted RBP9.7□□□□□ -0.86
SPC25YER018C YPR147CQ06522 304 aaKnown RBP9.7□□□□□ -0.86
SPC25YER018C YOL114CQ12322 202 aa9.7□□□□□ -0.86
SPC25YER018C RPL7AP05737 244 aaKnown RBP9.69□□□□□ -0.86
SPC25YER018C FUN19P28003 413 aaPredicted RBP9.69□□□□□ -0.86
SPC25YER018C COS9P36034 407 aa9.69□□□□□ -0.86
SPC25YER018C FMP23P38231 175 aa9.69□□□□□ -0.86
SPC25YER018C YER184CP39961 794 aa9.69□□□□□ -0.86
SPC25YER018C PCL6P40038 420 aa9.69□□□□□ -0.86
SPC25YER018C RFC4P40339 323 aaKnown RBP9.69□□□□□ -0.86
SPC25YER018C YIL169CP40442 995 aa9.69□□□□□ -0.86
SPC25YER018C BPL1P48445 690 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 122.9 ms