RNA–Protein interactions for RNA: YDR534C

FIT1, Transcript of Mannoprotein that is incorporated into the cell wall, yeast

Gene FIT1, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIT1	YDR534C	IRC24	P40580	263 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	YGL185C	P53100	379 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	OST6	Q03723	332 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	YLR173W	Q06247	608 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	RRI1	Q12468	440 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	HTB1	P02293	131 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	HTB2	P02294	131 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	ATP4	P05626	244 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	KIN28	P06242	306 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	RPB10	P22139	70 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	LRE1	P25579	583 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	DAL3	P32459	195 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	CDC12	P32468	407 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	VPH1	P32563	840 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	COS9	P36034	407 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	SDH4	P37298	181 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	HTD2	P38790	280 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	YHR122W	P38829	231 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	FMC1	P40491	155 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	SAM37	P50110	327 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	TYW3	P53177	273 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	TPS1	Q00764	495 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	AAT1	Q01802	451 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	HAS1	Q03532	505 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	CTK1	Q03957	528 aa	Known RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	CUE4	Q04201	117 aa	Predicted RBP	7.5	□□□□□ -1.21
FIT1	YDR534C	BLS1	Q06071	122 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	PLB3	Q08108	686 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	GPM2	Q12008	311 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	AHC1	Q12433	566 aa		7.5	□□□□□ -1.21
FIT1	YDR534C	SEC12	P11655	471 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	BUD5	P25300	642 aa	Predicted RBP	7.49	□□□□□ -1.21
FIT1	YDR534C	YCR099C	P25657	155 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	SUA5	P32579	426 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	MRPL28	P36527	147 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	HMT1	P38074	348 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	MRP21	P38175	177 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	AIM3	P38266	947 aa	Known RBP	7.49	□□□□□ -1.21
FIT1	YDR534C	EHT1	P38295	451 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	SHG1	P38337	142 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	LRP1	P38801	184 aa	Known RBP	7.49	□□□□□ -1.21
FIT1	YDR534C	PFD1	P46988	109 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	SYF2	P53277	215 aa	Predicted RBP	7.49	□□□□□ -1.21
FIT1	YDR534C	BUD17	P53727	317 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	ASI3	P53983	676 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	TRS31	Q03337	283 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	GRC3	Q07845	632 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	SDO1	Q07953	250 aa	Known RBP	7.49	□□□□□ -1.21
FIT1	YDR534C	OPI10	Q08202	246 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	DDC1	Q08949	612 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	ATG41	Q12048	136 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	FYV7	Q12247	151 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	MRX4	Q12467	430 aa		7.49	□□□□□ -1.21
FIT1	YDR534C	HTA1	P04911	132 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	7.48	□□□□□ -1.21	not detected
FIT1	YDR534C	YOL163W	P0CF20	169 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	YIH1	P25637	258 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	URK1	P27515	501 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	PRE4	P30657	266 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	AAR2	P32357	355 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	SFK1	P35735	353 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	7.48	□□□□□ -1.21	not detected
FIT1	YDR534C	UBA4	P38820	440 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	ASP1	P38986	381 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	CFD1	P40558	293 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	DPB11	P47027	764 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	YJR111C	P47148	283 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	VPS73	P53142	486 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	MPA43	P53583	542 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	IGO1	P53897	168 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	GIM3	P53900	129 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	GPI15	P53961	229 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	GOT1	Q03554	138 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	BOP2	Q06150	570 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	MRI1	Q06489	411 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	YTM1	Q12024	460 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	RRP42	Q12277	265 aa	Predicted RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	TY1A-NL1	Q12391	440 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	SKS1	Q12505	502 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	SRN2	Q99176	213 aa		7.48	□□□□□ -1.21
FIT1	YDR534C	MEX67	Q99257	599 aa	Known RBP	7.48	□□□□□ -1.21
FIT1	YDR534C	DST1	P07273	309 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	RPL31A	P0C2H8	113 aa	Known RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	RPL31B	P0C2H9	113 aa	Known RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	RRP7	P25368	297 aa	Predicted RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	MRP17	P28778	131 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	TKL2	P33315	681 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	MSN4	P33749	630 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	RAD55	P38953	406 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	SLZ1	P40167	298 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	GLC8	P41818	229 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	SSU1	P41930	458 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	PFS2	P42841	465 aa	Known RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	TIM21	P53220	239 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	PRM1	P53835	661 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	KTR6	P54070	446 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	VBA4	Q04602	768 aa	Known RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	BDS1	Q08347	646 aa		7.47	□□□□□ -1.21
FIT1	YDR534C	TIR4	Q12218	487 aa	Predicted RBP	7.47	□□□□□ -1.21
FIT1	YDR534C	COA6	Q3E846	104 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms