RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C MDM1Q01846 1127 aa-0.48□□□□□ -2.49
SPG3YDR504C SPH1Q06160 661 aa-0.48□□□□□ -2.49
SPG3YDR504C YAL063C-AQ3E791 96 aa-0.48□□□□□ -2.49
SPG3YDR504C SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.49□□□□□ -2.49not detected
SPG3YDR504C SPP381P38282 291 aaPredicted RBP-0.49□□□□□ -2.49
SPG3YDR504C SRP72P38688 640 aaKnown RBP-0.49□□□□□ -2.49
SPG3YDR504C COG3P40094 801 aa-0.49□□□□□ -2.49
SPG3YDR504C RSM27P53305 110 aa-0.49□□□□□ -2.49
SPG3YDR504C PDE2P06776 526 aa-0.5□□□□□ -2.49
SPG3YDR504C MDH1P17505 334 aaKnown RBP RIP-Chip data-0.5□□□□□ -2.49not detected
SPG3YDR504C YGR266WP53326 701 aa-0.5□□□□□ -2.49
SPG3YDR504C CIK1Q01649 594 aa-0.5□□□□□ -2.49
SPG3YDR504C AIM36Q03798 255 aa-0.5□□□□□ -2.49
SPG3YDR504C TAF11Q04226 346 aa-0.5□□□□□ -2.49
SPG3YDR504C RAD10P06838 210 aa-0.51□□□□□ -2.49
SPG3YDR504C YGL010WP25338 174 aa-0.51□□□□□ -2.49
SPG3YDR504C DOA4P32571 926 aa-0.51□□□□□ -2.49
SPG3YDR504C LST7P53237 242 aa-0.51□□□□□ -2.49
SPG3YDR504C MEH1Q02205 184 aa-0.51□□□□□ -2.49
SPG3YDR504C SVL3Q03088 825 aaKnown RBP-0.51□□□□□ -2.49
SPG3YDR504C CPR2P23285 205 aa-0.52□□□□□ -2.49
SPG3YDR504C ATG7P38862 630 aa-0.52□□□□□ -2.49
SPG3YDR504C YDR541CQ03049 344 aa-0.52□□□□□ -2.49
SPG3YDR504C BUR2Q05949 395 aa-0.52□□□□□ -2.49
SPG3YDR504C FPR1P20081 114 aaKnown RBP-0.53□□□□□ -2.49
SPG3YDR504C VPH2P32341 215 aa-0.53□□□□□ -2.49
SPG3YDR504C CDC13P32797 924 aaKnown RBP-0.53□□□□□ -2.49
SPG3YDR504C YBR220CP38318 560 aa-0.53□□□□□ -2.49
SPG3YDR504C YDR089WP38966 869 aa-0.53□□□□□ -2.49
SPG3YDR504C LYS12P40495 371 aaKnown RBP-0.53□□□□□ -2.49
SPG3YDR504C CIS3P47001 227 aa-0.53□□□□□ -2.49
SPG3YDR504C CAB4P53332 305 aa-0.53□□□□□ -2.49
SPG3YDR504C NDL1Q06568 189 aa-0.53□□□□□ -2.49
SPG3YDR504C UAF30Q08747 228 aa-0.53□□□□□ -2.49
SPG3YDR504C SUR1P33300 382 aa-0.54□□□□□ -2.5
SPG3YDR504C KAP104P38217 918 aaKnown RBP-0.54□□□□□ -2.5
SPG3YDR504C YHL026CP38740 315 aa-0.54□□□□□ -2.5
SPG3YDR504C SYS1P41544 203 aa-0.54□□□□□ -2.5
SPG3YDR504C TCB2P48231 1178 aa-0.54□□□□□ -2.5
SPG3YDR504C FCF1Q05498 189 aaPredicted RBP-0.54□□□□□ -2.5
SPG3YDR504C YOR268CQ08734 132 aa-0.54□□□□□ -2.5
SPG3YDR504C SLH1P53327 1967 aaKnown RBP-0.54□□□□□ -2.5
SPG3YDR504C MRPS5P33759 307 aa-0.55□□□□□ -2.5
SPG3YDR504C SHC1P39000 512 aa-0.55□□□□□ -2.5
SPG3YDR504C YJL016WP47072 561 aa-0.55□□□□□ -2.5
SPG3YDR504C YOR292CQ08743 309 aa-0.55□□□□□ -2.5
SPG3YDR504C RPN5Q12250 445 aaKnown RBP-0.55□□□□□ -2.5
SPG3YDR504C EFB1P32471 206 aaKnown RBP-0.56□□□□□ -2.5
SPG3YDR504C KRE6P32486 720 aa-0.56□□□□□ -2.5
SPG3YDR504C AIM29P36154 155 aa-0.56□□□□□ -2.5
SPG3YDR504C SMP3Q04174 516 aa-0.56□□□□□ -2.5
SPG3YDR504C CSM3Q04659 317 aa-0.56□□□□□ -2.5
SPG3YDR504C APC5Q08683 685 aa-0.56□□□□□ -2.5
SPG3YDR504C SFC1P33303 322 aa-0.57□□□□□ -2.5
SPG3YDR504C OST3P48439 350 aa-0.57□□□□□ -2.5
SPG3YDR504C YGL114WP53134 725 aa-0.57□□□□□ -2.5
SPG3YDR504C VAR1P02381 398 aa-0.58□□□□□ -2.5
SPG3YDR504C RAD7P06779 565 aa-0.58□□□□□ -2.5
SPG3YDR504C ADK2P26364 225 aa-0.58□□□□□ -2.5
SPG3YDR504C BUD2P33314 1104 aa-0.58□□□□□ -2.5
SPG3YDR504C KTI12P34253 313 aaKnown RBP-0.58□□□□□ -2.5
SPG3YDR504C LSM5P40089 93 aaKnown RBP-0.58□□□□□ -2.5
SPG3YDR504C FYV8P46949 817 aaKnown RBP-0.58□□□□□ -2.5
SPG3YDR504C RET3P53600 189 aa-0.58□□□□□ -2.5
SPG3YDR504C YNR066CP53752 436 aa-0.58□□□□□ -2.5
SPG3YDR504C ERB1Q04660 807 aaKnown RBP-0.58□□□□□ -2.5
SPG3YDR504C IPK1Q06667 281 aa-0.58□□□□□ -2.5
SPG3YDR504C YPR078CQ06813 372 aa-0.58□□□□□ -2.5
SPG3YDR504C FKS1P38631 1876 aaKnown RBP-0.58□□□□□ -2.5
SPG3YDR504C DBR1P24309 405 aaKnown RBP-0.59□□□□□ -2.5
SPG3YDR504C YJL118WP47022 219 aa-0.59□□□□□ -2.5
SPG3YDR504C RPS16AP0CX51 143 aaKnown RBP-0.6□□□□□ -2.51
SPG3YDR504C RPS16BP0CX52 143 aaKnown RBP-0.6□□□□□ -2.51
SPG3YDR504C SPL2P38839 148 aa-0.6□□□□□ -2.51
SPG3YDR504C NDE1P40215 560 aa-0.6□□□□□ -2.51
SPG3YDR504C YGR111WP53265 400 aa-0.6□□□□□ -2.51
SPG3YDR504C DAD3P69850 94 aa-0.6□□□□□ -2.51
SPG3YDR504C CAB5Q03941 241 aa-0.6□□□□□ -2.51
SPG3YDR504C AIM33Q04516 312 aa-0.6□□□□□ -2.51
SPG3YDR504C ARC18Q05933 178 aaKnown RBP-0.6□□□□□ -2.51
SPG3YDR504C YPL245WQ12179 454 aaKnown RBP-0.6□□□□□ -2.51
SPG3YDR504C DCN1Q12395 269 aa-0.6□□□□□ -2.51
SPG3YDR504C GAL7P08431 366 aa-0.61□□□□□ -2.51
SPG3YDR504C RPL2AP0CX45 254 aaKnown RBP-0.61□□□□□ -2.51
SPG3YDR504C RPL2BP0CX46 254 aaKnown RBP-0.61□□□□□ -2.51
SPG3YDR504C SPS100P13130 326 aa-0.61□□□□□ -2.51
SPG3YDR504C NFU1P32860 256 aa-0.61□□□□□ -2.51
SPG3YDR504C MBA1P38300 278 aa-0.61□□□□□ -2.51
SPG3YDR504C PET8P38921 284 aa-0.61□□□□□ -2.51
SPG3YDR504C LCP5P40079 357 aaPredicted RBP-0.61□□□□□ -2.51
SPG3YDR504C TVP15Q03860 143 aa-0.61□□□□□ -2.51
SPG3YDR504C SFI1Q12369 946 aa-0.61□□□□□ -2.51
SPG3YDR504C PAN1P32521 1480 aa-0.61□□□□□ -2.51
SPG3YDR504C RAS2P01120 322 aaKnown RBP-0.62□□□□□ -2.51
SPG3YDR504C CAT2P32796 670 aaKnown RBP-0.62□□□□□ -2.51
SPG3YDR504C PES4P39684 611 aa-0.62□□□□□ -2.51
SPG3YDR504C LIF1P53150 421 aa-0.62□□□□□ -2.51
SPG3YDR504C NNT1Q05874 261 aa-0.62□□□□□ -2.51
SPG3YDR504C STE23Q06010 1027 aa-0.62□□□□□ -2.51
SPG3YDR504C MRX9Q07349 420 aaKnown RBP-0.62□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms