RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C COG2P53271 262 aa2.39□□□□□ -2.03
SSN2YDR443C CPD1P53314 239 aa2.39□□□□□ -2.03
SSN2YDR443C CDC14Q00684 551 aa2.39□□□□□ -2.03
SSN2YDR443C HER2Q03557 464 aa2.39□□□□□ -2.03
SSN2YDR443C MSS11Q03825 758 aa2.39□□□□□ -2.03
SSN2YDR443C TY1A-MR1Q04215 440 aa2.39□□□□□ -2.03
SSN2YDR443C HSP31Q04432 237 aa2.39□□□□□ -2.03
SSN2YDR443C ARC18Q05933 178 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C MUM3Q08750 479 aa2.39□□□□□ -2.03
SSN2YDR443C CHO2P05374 869 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C RPL12AP0CX53 165 aaKnown RBP2.39□□□□□ -2.03
SSN2YDR443C RPL12BP0CX54 165 aa2.39□□□□□ -2.03
SSN2YDR443C CNA1P23287 553 aa2.39□□□□□ -2.03
SSN2YDR443C ZRT1P32804 376 aa2.39□□□□□ -2.03
SSN2YDR443C CAF4P36130 643 aa2.39□□□□□ -2.03
SSN2YDR443C FLO10P36170 1169 aa2.39□□□□□ -2.03
SSN2YDR443C YPT10P38146 199 aa2.39□□□□□ -2.03
SSN2YDR443C FES1P38260 290 aa2.39□□□□□ -2.03
SSN2YDR443C OPY1P38271 328 aa2.39□□□□□ -2.03
SSN2YDR443C YFH7P43591 353 aa2.39□□□□□ -2.03
SSN2YDR443C SFH5P47008 294 aa2.39□□□□□ -2.03
SSN2YDR443C YJR011CP47086 261 aaPredicted RBP2.39□□□□□ -2.03
SSN2YDR443C HOC1P47124 396 aa2.39□□□□□ -2.03
SSN2YDR443C YNL095CP53932 642 aa2.39□□□□□ -2.03
SSN2YDR443C MMT1Q03218 510 aa2.39□□□□□ -2.03
SSN2YDR443C YML096WQ04489 525 aa2.39□□□□□ -2.03
SSN2YDR443C THI3Q07471 609 aa2.39□□□□□ -2.03
SSN2YDR443C NDE2Q07500 545 aa2.39□□□□□ -2.03
SSN2YDR443C MCH4Q08268 501 aa2.39□□□□□ -2.03
SSN2YDR443C NCE102Q12207 173 aaRIP-Chip data2.39□□□□□ -2.03not detected
SSN2YDR443C LCB4Q12246 624 aa2.39□□□□□ -2.03
SSN2YDR443C ADE5,7P07244 802 aaKnown RBP2.38□□□□□ -2.03
SSN2YDR443C SNF3P10870 884 aa2.38□□□□□ -2.03
SSN2YDR443C TKL1P23254 680 aaKnown RBP2.38□□□□□ -2.03
SSN2YDR443C NUF2P33895 451 aa2.38□□□□□ -2.03
SSN2YDR443C CBP4P37267 147 aa2.38□□□□□ -2.03
SSN2YDR443C IKI1P38874 309 aa2.38□□□□□ -2.03
SSN2YDR443C NPT1P39683 429 aaKnown RBP2.38□□□□□ -2.03
SSN2YDR443C RPC17P47076 161 aa2.38□□□□□ -2.03
SSN2YDR443C MRPL51Q06090 140 aaPredicted RBP2.38□□□□□ -2.03
SSN2YDR443C YLR036CQ07986 203 aa2.38□□□□□ -2.03
SSN2YDR443C YOR289WQ12012 251 aaPredicted RBP2.38□□□□□ -2.03
SSN2YDR443C TPK3P05986 398 aa2.38□□□□□ -2.03
SSN2YDR443C NAM9P27929 486 aa2.38□□□□□ -2.03
SSN2YDR443C SPS18P32572 300 aa2.38□□□□□ -2.03
SSN2YDR443C YBR241CP38142 488 aa2.38□□□□□ -2.03
SSN2YDR443C OSH3P38713 996 aaKnown RBP2.38□□□□□ -2.03
SSN2YDR443C FAA2P39518 744 aa2.38□□□□□ -2.03
SSN2YDR443C BMT5P40493 336 aa2.38□□□□□ -2.03
SSN2YDR443C YFR057WP43625 151 aa2.38□□□□□ -2.03
SSN2YDR443C TAD2P47058 250 aa2.38□□□□□ -2.03
SSN2YDR443C HMS2P47175 358 aa2.38□□□□□ -2.03
SSN2YDR443C YGR151CP53287 111 aa2.38□□□□□ -2.03
SSN2YDR443C MTM1P53320 366 aa2.38□□□□□ -2.03
SSN2YDR443C KRE28Q04431 385 aa2.38□□□□□ -2.03
SSN2YDR443C JLP1Q12358 412 aa2.38□□□□□ -2.03
SSN2YDR443C NDC1P32500 655 aa2.38□□□□□ -2.03
SSN2YDR443C SSO1P32867 290 aa2.38□□□□□ -2.03
SSN2YDR443C MRPL6P32904 214 aa2.38□□□□□ -2.03
SSN2YDR443C LST4P34239 828 aa2.38□□□□□ -2.03
SSN2YDR443C ECM15P35195 104 aa2.38□□□□□ -2.03
SSN2YDR443C ACO2P39533 789 aa2.38□□□□□ -2.03
SSN2YDR443C YAL037WP39728 267 aa2.38□□□□□ -2.03
SSN2YDR443C YAT2P40017 923 aa2.38□□□□□ -2.03
SSN2YDR443C YPS6P40583 537 aa2.38□□□□□ -2.03
SSN2YDR443C CIN2P46670 268 aa2.38□□□□□ -2.03
SSN2YDR443C JHD2P47156 728 aaPredicted RBP2.38□□□□□ -2.03
SSN2YDR443C NUP53Q03790 475 aa2.38□□□□□ -2.03
SSN2YDR443C YDR132CQ03900 495 aa2.38□□□□□ -2.03
SSN2YDR443C ILV1P00927 576 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C HIS5P07172 385 aa2.37□□□□□ -2.03
SSN2YDR443C PET54P10834 293 aa2.37□□□□□ -2.03
SSN2YDR443C GCY1P14065 312 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SSN2YDR443C CBS2P14905 389 aa2.37□□□□□ -2.03
SSN2YDR443C MRPL9P31334 269 aa2.37□□□□□ -2.03
SSN2YDR443C COX13P32799 129 aa2.37□□□□□ -2.03
SSN2YDR443C CSG2P35206 410 aa2.37□□□□□ -2.03
SSN2YDR443C YBR056WP38081 501 aa2.37□□□□□ -2.03
SSN2YDR443C NQM1P53228 333 aaPredicted RBP2.37□□□□□ -2.03
SSN2YDR443C MSO1P53604 210 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C YNL140CP53910 189 aa2.37□□□□□ -2.03
SSN2YDR443C SKI7Q08491 747 aaPredicted RBP2.37□□□□□ -2.03
SSN2YDR443C APC9Q12107 265 aa2.37□□□□□ -2.03
SSN2YDR443C YLR049CQ12110 428 aa2.37□□□□□ -2.03
SSN2YDR443C ATP6P00854 259 aa2.37□□□□□ -2.03
SSN2YDR443C RPO26P20435 155 aa2.37□□□□□ -2.03
SSN2YDR443C POF1P25576 258 aa2.37□□□□□ -2.03
SSN2YDR443C PDR3P33200 976 aa2.37□□□□□ -2.03
SSN2YDR443C GRX8Q05926 109 aa2.37□□□□□ -2.03
SSN2YDR443C CTR3Q06686 241 aa2.37□□□□□ -2.03
SSN2YDR443C ACK1Q07622 623 aaPredicted RBP2.37□□□□□ -2.03
SSN2YDR443C ICT1Q12385 394 aa2.37□□□□□ -2.03
SSN2YDR443C ARF1P11076 181 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C CDC10P25342 322 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C KAR4P25583 335 aa2.37□□□□□ -2.03
SSN2YDR443C CSE1P33307 960 aa2.37□□□□□ -2.03
SSN2YDR443C GLY1P37303 387 aaKnown RBP2.37□□□□□ -2.03
SSN2YDR443C CIN5P40917 295 aa2.37□□□□□ -2.03
SSN2YDR443C PRY1P47032 299 aa2.37□□□□□ -2.03
SSN2YDR443C YLR460CP54007 376 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms