RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SHR5P41912 237 aa1.54□□□□□ -2.16
CFT1YDR301W YGR016WP53209 190 aa1.54□□□□□ -2.16
CFT1YDR301W SOK2P53438 785 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W HHT1P61830 136 aa1.54□□□□□ -2.16
CFT1YDR301W HOT1Q03213 719 aa1.54□□□□□ -2.16
CFT1YDR301W ARP10Q04549 284 aa1.54□□□□□ -2.16
CFT1YDR301W LUC7Q07508 261 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W YLR040CQ07988 224 aa1.54□□□□□ -2.16
CFT1YDR301W SFG1Q12507 346 aa1.54□□□□□ -2.16
CFT1YDR301W SIR3P06701 978 aa1.54□□□□□ -2.16
CFT1YDR301W RED1P14291 827 aa1.54□□□□□ -2.16
CFT1YDR301W NCP1P16603 691 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W KGD1P20967 1014 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W IDH2P28241 369 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W TIM12P32830 109 aa1.54□□□□□ -2.16
CFT1YDR301W DHR2P36009 735 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W AUR1P36107 401 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W EGD2P38879 174 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W TOK1P40310 691 aa1.54□□□□□ -2.16
CFT1YDR301W IRC5P43610 853 aa1.54□□□□□ -2.16
CFT1YDR301W BPL1P48445 690 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W MPA43P53583 542 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W YNR040WP53736 256 aa1.54□□□□□ -2.16
CFT1YDR301W ATG21Q02887 496 aa1.54□□□□□ -2.16
CFT1YDR301W CTL1Q03220 320 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W YDR209CQ03480 137 aa1.54□□□□□ -2.16
CFT1YDR301W RSN1Q03516 953 aa1.54□□□□□ -2.16
CFT1YDR301W SNX41Q04053 625 aa1.54□□□□□ -2.16
CFT1YDR301W KRE28Q04431 385 aa1.54□□□□□ -2.16
CFT1YDR301W VBA4Q04602 768 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W YLR352WQ06479 807 aa1.54□□□□□ -2.16
CFT1YDR301W MET32Q12041 191 aa1.54□□□□□ -2.16
CFT1YDR301W RTN2Q12443 393 aa1.54□□□□□ -2.16
CFT1YDR301W GLT1Q12680 2145 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W RPC40P07703 335 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W IDP1P21954 428 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W CNA1P23287 553 aa1.54□□□□□ -2.16
CFT1YDR301W STE50P25344 346 aa1.54□□□□□ -2.16
CFT1YDR301W ATS1P31386 333 aa1.54□□□□□ -2.16
CFT1YDR301W GDH2P33327 1092 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W JEN1P36035 616 aa1.54□□□□□ -2.16
CFT1YDR301W YPK3P38070 525 aa1.54□□□□□ -2.16
CFT1YDR301W YHR210CP38893 341 aa1.54□□□□□ -2.16
CFT1YDR301W CHL4P38907 458 aa1.54□□□□□ -2.16
CFT1YDR301W SWD1P39706 426 aa1.54□□□□□ -2.16
CFT1YDR301W YNL195CP40168 261 aa1.54□□□□□ -2.16
CFT1YDR301W MET28P40573 187 aa1.54□□□□□ -2.16
CFT1YDR301W YJL218WP40892 196 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W PMT6P42934 759 aa1.54□□□□□ -2.16
CFT1YDR301W MNN5P46982 586 aa1.54□□□□□ -2.16
CFT1YDR301W YJR141WP47172 347 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W CCC1P47818 322 aa1.54□□□□□ -2.16
CFT1YDR301W YGR045CP53229 120 aa1.54□□□□□ -2.16
CFT1YDR301W DBP6P53734 629 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W CIK1Q01649 594 aa1.54□□□□□ -2.16
CFT1YDR301W SKI8Q02793 397 aaPredicted RBP1.54□□□□□ -2.16
CFT1YDR301W YMD8Q03697 442 aa1.54□□□□□ -2.16
CFT1YDR301W OST6Q03723 332 aa1.54□□□□□ -2.16
CFT1YDR301W TY1A-DR2Q03964 440 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W YDR391CQ04170 232 aa1.54□□□□□ -2.16
CFT1YDR301W YMR087WQ04299 284 aa1.54□□□□□ -2.16
CFT1YDR301W API2Q04413 109 aa1.54□□□□□ -2.16
CFT1YDR301W YPR147CQ06522 304 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W ARV1Q06541 321 aa1.54□□□□□ -2.16
CFT1YDR301W MCH4Q08268 501 aa1.54□□□□□ -2.16
CFT1YDR301W YOR376WQ08900 122 aa1.54□□□□□ -2.16
CFT1YDR301W UIP4Q08926 304 aa1.54□□□□□ -2.16
CFT1YDR301W YOR343CQ12484 108 aa1.54□□□□□ -2.16
CFT1YDR301W MTR10Q99189 972 aa1.54□□□□□ -2.16
CFT1YDR301W FAS1P07149 2051 aaKnown RBP1.54□□□□□ -2.16
CFT1YDR301W GPI12P23797 304 aa1.53□□□□□ -2.16
CFT1YDR301W KRR1P25586 316 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W NTG1P31378 399 aa1.53□□□□□ -2.16
CFT1YDR301W VPS17P32913 551 aa1.53□□□□□ -2.16
CFT1YDR301W TOD6P34219 525 aa1.53□□□□□ -2.16
CFT1YDR301W AIM3P38266 947 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W MBA1P38300 278 aa1.53□□□□□ -2.16
CFT1YDR301W SKN7P38889 622 aa1.53□□□□□ -2.16
CFT1YDR301W PCL6P40038 420 aa1.53□□□□□ -2.16
CFT1YDR301W BAP3P41815 604 aa1.53□□□□□ -2.16
CFT1YDR301W RPE1P46969 238 aa1.53□□□□□ -2.16
CFT1YDR301W SSY5P47002 699 aa1.53□□□□□ -2.16
CFT1YDR301W YAE1P47118 141 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W YGL204CP53089 101 aa1.53□□□□□ -2.16
CFT1YDR301W RPN14P53196 417 aa1.53□□□□□ -2.16
CFT1YDR301W MEP3P53390 489 aa1.53□□□□□ -2.16
CFT1YDR301W CUZ1P53899 274 aa1.53□□□□□ -2.16
CFT1YDR301W YPL068CQ02749 293 aa1.53□□□□□ -2.16
CFT1YDR301W SNO4Q04902 237 aa1.53□□□□□ -2.16
CFT1YDR301W NEJ1Q06148 342 aa1.53□□□□□ -2.16
CFT1YDR301W HSP33Q08914 237 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W RKM1Q08961 583 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W HSP32Q08992 237 aa1.53□□□□□ -2.16
CFT1YDR301W YGK3Q12222 375 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
CFT1YDR301W TY1A-LR4P0C2I8 440 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W TY1A-DR6P0CX70 440 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-ER1P0CX71 440 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-LR2P0CX72 440 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-PLP0CX73 440 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms