RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A BUR2Q05949 395 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A RDL2Q08742 149 aaKnown RBP2.31□□□□□ -2.04
YDR261W-AYDR261W-A YPR063CQ12160 140 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A TFC7Q12415 435 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A PRM4Q12498 284 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A POT1P27796 417 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
YDR261W-AYDR261W-A ASP1P38986 381 aaPredicted RBP2.3□□□□□ -2.04
YDR261W-AYDR261W-A YGR016WP53209 190 aa2.3□□□□□ -2.04
YDR261W-AYDR261W-A CSI1Q04368 295 aa2.3□□□□□ -2.04
YDR261W-AYDR261W-A MIM1Q08176 113 aa2.3□□□□□ -2.04
YDR261W-AYDR261W-A TRM10Q12400 293 aa2.3□□□□□ -2.04
YDR261W-AYDR261W-A ERD1P16151 362 aa2.29□□□□□ -2.04
YDR261W-AYDR261W-A ACB1P31787 87 aa2.29□□□□□ -2.04
YDR261W-AYDR261W-A RVB1Q03940 463 aaKnown RBP2.29□□□□□ -2.04
YDR261W-AYDR261W-A PML1Q07930 204 aaPredicted RBP2.29□□□□□ -2.04
YDR261W-AYDR261W-A YPL264CQ08980 353 aa2.29□□□□□ -2.04
YDR261W-AYDR261W-A YPL245WQ12179 454 aaKnown RBP2.29□□□□□ -2.04
YDR261W-AYDR261W-A IES3Q12345 250 aa2.29□□□□□ -2.04
YDR261W-AYDR261W-A CBP2P03874 630 aaPredicted RBP2.28□□□□□ -2.04
YDR261W-AYDR261W-A UTR5P32630 166 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A ALK2P32789 676 aaPredicted RBP2.28□□□□□ -2.04
YDR261W-AYDR261W-A BUD2P33314 1104 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A ECO1P43605 281 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A YDR114CQ04597 100 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A GTO3Q04806 366 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A YDR262WQ12331 272 aa2.28□□□□□ -2.04
YDR261W-AYDR261W-A ARO4P32449 370 aaKnown RBP2.27□□□□□ -2.05
YDR261W-AYDR261W-A CSE1P33307 960 aa2.27□□□□□ -2.05
YDR261W-AYDR261W-A FYV8P46949 817 aaKnown RBP2.27□□□□□ -2.05
YDR261W-AYDR261W-A SHE4P51534 789 aa2.27□□□□□ -2.05
YDR261W-AYDR261W-A YGL088WP53151 121 aa2.27□□□□□ -2.05
YDR261W-AYDR261W-A YNR066CP53752 436 aa2.27□□□□□ -2.05
YDR261W-AYDR261W-A RNR2P09938 399 aaKnown RBP2.26□□□□□ -2.05
YDR261W-AYDR261W-A SMI1P32566 505 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A YEL043WP32618 956 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A SUR1P33300 382 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A SDH4P37298 181 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A MED8P38304 223 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A APE4P38821 490 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A EDC2P40023 145 aaPredicted RBP2.26□□□□□ -2.05
YDR261W-AYDR261W-A YFR045WP43617 309 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A YGR168CP53293 376 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A PDR16P53860 351 aaKnown RBP2.26□□□□□ -2.05
YDR261W-AYDR261W-A YPL113CQ02961 396 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A YDR222WQ04925 415 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A DXO1Q06349 442 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A RLP24Q07915 199 aaKnown RBP2.26□□□□□ -2.05
YDR261W-AYDR261W-A YLR012CQ07927 99 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A VIK1Q12045 647 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A SGT2Q12118 346 aaKnown RBP2.26□□□□□ -2.05
YDR261W-AYDR261W-A ERP3Q12403 225 aa2.26□□□□□ -2.05
YDR261W-AYDR261W-A DAL81P21657 970 aa2.25□□□□□ -2.05
YDR261W-AYDR261W-A MIG1P27705 504 aa2.25□□□□□ -2.05
YDR261W-AYDR261W-A PET8P38921 284 aa2.25□□□□□ -2.05
YDR261W-AYDR261W-A SMC2P38989 1170 aaKnown RBP2.25□□□□□ -2.05
YDR261W-AYDR261W-A HSH155P49955 971 aaKnown RBP2.25□□□□□ -2.05
YDR261W-AYDR261W-A YNL040WP53960 456 aaPredicted RBP2.25□□□□□ -2.05
YDR261W-AYDR261W-A PSY3Q12318 242 aa2.25□□□□□ -2.05
YDR261W-AYDR261W-A MET2P08465 486 aa2.24□□□□□ -2.05
YDR261W-AYDR261W-A VPH1P32563 840 aaKnown RBP2.24□□□□□ -2.05
YDR261W-AYDR261W-A YPL080CQ02826 108 aa2.24□□□□□ -2.05
YDR261W-AYDR261W-A IRC4Q03036 179 aa2.24□□□□□ -2.05
YDR261W-AYDR261W-A MRX4Q12467 430 aa2.24□□□□□ -2.05
YDR261W-AYDR261W-A RPL18AP0CX49 186 aaKnown RBP2.23□□□□□ -2.05
YDR261W-AYDR261W-A RPL18BP0CX50 186 aaKnown RBP2.23□□□□□ -2.05
YDR261W-AYDR261W-A SWI3P32591 825 aa2.23□□□□□ -2.05
YDR261W-AYDR261W-A YKR032WP36127 104 aa2.23□□□□□ -2.05
YDR261W-AYDR261W-A SCC4P40090 624 aa2.23□□□□□ -2.05
YDR261W-AYDR261W-A UBX2Q04228 584 aa2.23□□□□□ -2.05
YDR261W-AYDR261W-A SPT7P35177 1332 aa2.23□□□□□ -2.05
YDR261W-AYDR261W-A ZRT1P32804 376 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A MRPL6P32904 214 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A BLI1P35727 113 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A AIM29P36154 155 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A LIN1P38852 340 aaPredicted RBP2.22□□□□□ -2.05
YDR261W-AYDR261W-A PES4P39684 611 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A ACT1P60010 375 aaKnown RBP2.22□□□□□ -2.05
YDR261W-AYDR261W-A SNX41Q04053 625 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A ARC18Q05933 178 aaKnown RBP2.22□□□□□ -2.05
YDR261W-AYDR261W-A YOR292CQ08743 309 aa2.22□□□□□ -2.05
YDR261W-AYDR261W-A GAL3P13045 520 aa2.21□□□□□ -2.06
YDR261W-AYDR261W-A YHR035WP38769 630 aa2.21□□□□□ -2.06
YDR261W-AYDR261W-A SOP4P39543 234 aaPredicted RBP2.21□□□□□ -2.06
YDR261W-AYDR261W-A MIX17Q03667 156 aa2.21□□□□□ -2.06
YDR261W-AYDR261W-A UTP23Q12339 254 aaKnown RBP2.21□□□□□ -2.06
YDR261W-AYDR261W-A VPS1P21576 704 aaKnown RBP2.2□□□□□ -2.06
YDR261W-AYDR261W-A UIP5P36137 443 aa2.2□□□□□ -2.06
YDR261W-AYDR261W-A UTP25P40498 721 aaKnown RBP2.2□□□□□ -2.06
YDR261W-AYDR261W-A SEC13Q04491 297 aaKnown RBP2.2□□□□□ -2.06
YDR261W-AYDR261W-A SAM4Q08985 325 aaKnown RBP2.2□□□□□ -2.06
YDR261W-AYDR261W-A LAG2Q92325 660 aa2.2□□□□□ -2.06
YDR261W-AYDR261W-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
YDR261W-AYDR261W-A YAK1P14680 807 aa2.19□□□□□ -2.06
YDR261W-AYDR261W-A YFL040WP43562 540 aa2.19□□□□□ -2.06
YDR261W-AYDR261W-A CLP1Q08685 445 aaPredicted RBP2.19□□□□□ -2.06
YDR261W-AYDR261W-A YPL278CQ08990 100 aa2.19□□□□□ -2.06
YDR261W-AYDR261W-A KRE1P17260 313 aa2.18□□□□□ -2.06
YDR261W-AYDR261W-A CDC42P19073 191 aa2.18□□□□□ -2.06
YDR261W-AYDR261W-A PRE7P23724 241 aaKnown RBP2.18□□□□□ -2.06
YDR261W-AYDR261W-A RSA4P25382 515 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms