RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	ERP1	Q05359	219 aa	Known RBP	4.22	□□□□□ -1.73
NUP42	YDR192C	RPN8	Q08723	338 aa	Known RBP	4.22	□□□□□ -1.73
NUP42	YDR192C	RKM1	Q08961	583 aa	Predicted RBP	4.22	□□□□□ -1.73
NUP42	YDR192C	ACC1	Q00955	2233 aa	Known RBP	4.22	□□□□□ -1.73
NUP42	YDR192C	MSF1	P08425	469 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YAR066W	P0CX18	203 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YHR214W	P0CX19	203 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	ATR1	P13090	542 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	KSS1	P14681	368 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	CBS2	P14905	389 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	FAR1	P21268	830 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	CCA1	P21269	546 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	MED6	P38782	295 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	RBG1	P39729	369 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	THO1	P40040	218 aa	Known RBP	4.21	□□□□□ -1.74
NUP42	YDR192C	UTP18	P40362	594 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP42	YDR192C	MAM33	P40513	266 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	GAB1	P41733	394 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	GWT1	P47026	490 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YJR030C	P47101	745 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	SSN8	P47821	323 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	GPI8	P49018	411 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YGR015C	P53208	328 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YNR068C	P53754	272 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YNL095C	P53932	642 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	CRZ1	P53968	678 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	GAS3	Q03655	524 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	PEX12	Q04370	399 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	EMI1	Q04406	187 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YDR124W	Q04608	324 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	RSA1	Q08932	381 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	SMF3	Q12078	473 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP42	YDR192C	RMD5	Q12508	421 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	YCL012C	Q8J0M4	134 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	IRA2	P19158	3079 aa		4.21	□□□□□ -1.74
NUP42	YDR192C	RAS2	P01120	322 aa	Known RBP	4.2	□□□□□ -1.74
NUP42	YDR192C	SCEI	P03882	235 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	FBA1	P14540	359 aa	Known RBP	4.2	□□□□□ -1.74
NUP42	YDR192C	SPO7	P18410	259 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	ERV1	P27882	189 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	CIN8	P27895	1000 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	PUP2	P32379	260 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	APE2	P32454	952 aa	Known RBP	4.2	□□□□□ -1.74
NUP42	YDR192C	YHR127W	P38833	243 aa	Known RBP	4.2	□□□□□ -1.74
NUP42	YDR192C	ISC1	P40015	477 aa	Known RBP	4.2	□□□□□ -1.74
NUP42	YDR192C	SHO1	P40073	367 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	YJL055W	P47044	245 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	YET2	Q04210	160 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	RIF2	Q06208	395 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	MFG1	Q07684	458 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	VPS68	Q12016	184 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	VIK1	Q12045	647 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	YPR011C	Q12251	326 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	RKM5	Q12367	367 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	RPN6	Q12377	434 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	MHF2	Q3E829	80 aa		4.2	□□□□□ -1.74
NUP42	YDR192C	SEC63	P14906	663 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	DBP3	P20447	523 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	CMK2	P22517	447 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	RPI1	P23250	407 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	RHB1	P25378	209 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	RPL5	P26321	297 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	ECM25	P32525	599 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	SSO1	P32867	290 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	MRPL17	P36528	281 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	YPT35	P38815	214 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	MDM31	P38880	579 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	FAA2	P39518	744 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	RGI1	P40043	161 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	PDS1	P40316	373 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	AGP3	P43548	558 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	RBL2	P48606	106 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	YPT32	P51996	222 aa	Known RBP	4.19	□□□□□ -1.74
NUP42	YDR192C	SDT1	P53078	280 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	ODC1	Q03028	310 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	YDR387C	Q04162	555 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	PLB3	Q08108	686 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	REX4	Q08237	289 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	AEP3	Q12089	606 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	SFM1	Q12314	213 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	MTR10	Q99189	972 aa		4.19	□□□□□ -1.74
NUP42	YDR192C	RPS14A	P06367	137 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	STE7	P06784	515 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	RPL20A	P0CX23	172 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	RPL20B	P0CX24	172 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	YAK1	P14680	807 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	GRR1	P24814	1151 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	PEX3	P28795	441 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	ZUO1	P32527	433 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	SDH3	P33421	198 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	PTC1	P35182	281 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	AST1	P35183	429 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	TRM7	P38238	310 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	INM1	P38710	295 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	MNN9	P39107	395 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	RPS14B	P39516	138 aa	Known RBP	4.18	□□□□□ -1.74
NUP42	YDR192C	SNL1	P40548	159 aa		4.18	□□□□□ -1.74
NUP42	YDR192C	FAR7	P43592	221 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 1301.6 ms