RNA–Protein interactions for RNA: YDR125C

ECM18, Transcript of Protein of unknown function, yeast

Gene ECM18, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM18	YDR125C	TPC1	P53257	314 aa		3.01	□□□□□ -1.93
ECM18	YDR125C	YNL134C	P53912	376 aa	Known RBP	3.01	□□□□□ -1.93
ECM18	YDR125C	REX2	P54964	269 aa	Known RBP	3.01	□□□□□ -1.93
ECM18	YDR125C	TPS1	Q00764	495 aa	Known RBP	3.01	□□□□□ -1.93
ECM18	YDR125C	MCH1	Q07376	486 aa		3.01	□□□□□ -1.93
ECM18	YDR125C	ATP16	Q12165	160 aa		3.01	□□□□□ -1.93
ECM18	YDR125C	QCR6	P00127	147 aa		3	□□□□□ -1.93
ECM18	YDR125C	REP1	P03871	373 aa		3	□□□□□ -1.93
ECM18	YDR125C	HEM4	P06174	275 aa		3	□□□□□ -1.93
ECM18	YDR125C	RPS18A	P0CX55	146 aa	Known RBP	3	□□□□□ -1.93
ECM18	YDR125C	RPS18B	P0CX56	146 aa	Predicted RBP	3	□□□□□ -1.93
ECM18	YDR125C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
ECM18	YDR125C	MRPL27	P36526	146 aa	Predicted RBP	3	□□□□□ -1.93
ECM18	YDR125C	YBR062C	P38239	180 aa		3	□□□□□ -1.93
ECM18	YDR125C	SPT8	P38915	602 aa		3	□□□□□ -1.93
ECM18	YDR125C	RCY1	P39531	840 aa		3	□□□□□ -1.93
ECM18	YDR125C	SEH1	P53011	349 aa	Known RBP	3	□□□□□ -1.93
ECM18	YDR125C	VAC7	P53950	1165 aa		3	□□□□□ -1.93
ECM18	YDR125C	POL30	P15873	258 aa	Known RBP	3	□□□□□ -1.93
ECM18	YDR125C	CDC42	P19073	191 aa		3	□□□□□ -1.93
ECM18	YDR125C	CMK2	P22517	447 aa		3	□□□□□ -1.93
ECM18	YDR125C	MIR1	P23641	311 aa	Known RBP	3	□□□□□ -1.93
ECM18	YDR125C	COY1	P34237	679 aa		3	□□□□□ -1.93
ECM18	YDR125C	WSC4	P38739	605 aa		3	□□□□□ -1.93
ECM18	YDR125C	PET8	P38921	284 aa		3	□□□□□ -1.93
ECM18	YDR125C	PEX22	P39718	180 aa		3	□□□□□ -1.93
ECM18	YDR125C	GDS1	P41913	522 aa		3	□□□□□ -1.93
ECM18	YDR125C	EMC2	P47133	292 aa	Known RBP	3	□□□□□ -1.93
ECM18	YDR125C	CDH1	P53197	566 aa		3	□□□□□ -1.93
ECM18	YDR125C	SPP2	Q02521	185 aa		3	□□□□□ -1.93
ECM18	YDR125C	SIA1	Q12212	622 aa		3	□□□□□ -1.93
ECM18	YDR125C	GIT1	P25346	518 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	NTG1	P31378	399 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	ZRT1	P32804	376 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	COS9	P36034	407 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	CHL4	P38907	458 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	KEL2	P50090	882 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	FLC3	P53121	802 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	SED5	Q01590	340 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	ENT5	Q03769	411 aa	Known RBP	2.99	□□□□□ -1.93
ECM18	YDR125C	CTS2	Q06350	511 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	TAZ1	Q06510	381 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	MIM1	Q08176	113 aa		2.99	□□□□□ -1.93
ECM18	YDR125C	STE7	P06784	515 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	SWD2	P36104	329 aa	Predicted RBP	2.98	□□□□□ -1.93
ECM18	YDR125C	HIS2	P38635	335 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	FHL1	P39521	936 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	YNL320W	P42840	284 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	AGP3	P43548	558 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	PMT4	P46971	762 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	IRC4	Q03036	179 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	INP2	Q03824	705 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	YLR012C	Q07927	99 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	IES4	Q08561	116 aa		2.98	□□□□□ -1.93
ECM18	YDR125C	RDL2	Q08742	149 aa	Known RBP	2.98	□□□□□ -1.93
ECM18	YDR125C	RPL31A	P0C2H8	113 aa	Known RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	RSR1	P13856	272 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	MER1	P16523	270 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	RBK1	P25332	333 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	ICL1	P28240	557 aa	Predicted RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	ACB1	P31787	87 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	SOL2	P37262	315 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	YMR262W	P38430	313 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	LSM12	P38828	187 aa	Known RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	SHQ1	P40486	507 aa	Predicted RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	AIM23	P47015	356 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	TIM21	P53220	239 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	YNL040W	P53960	456 aa	Predicted RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	PRP38	Q00723	242 aa	Predicted RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	RPL21A	Q02753	160 aa	Known RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	YMR010W	Q03687	405 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	SNX41	Q04053	625 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	BCP1	Q06338	283 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	CLP1	Q08685	445 aa	Predicted RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	RUD3	Q12234	484 aa	Known RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	HMS1	Q12398	434 aa		2.97	□□□□□ -1.93
ECM18	YDR125C	RPL21B	Q12672	160 aa	Known RBP	2.97	□□□□□ -1.93
ECM18	YDR125C	COX2	P00410	251 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	ATP6	P00854	259 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	YSR3	P23501	404 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	CWP1	P28319	239 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	MEI5	P32489	222 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	DOA4	P32571	926 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	GCG1	P32656	232 aa	Known RBP	2.96	□□□□□ -1.94
ECM18	YDR125C	PDC2	P32896	925 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	YKT6	P36015	200 aa	Known RBP	2.96	□□□□□ -1.94
ECM18	YDR125C	RCK1	P38622	512 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	YHR045W	P38775	560 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	PRM9	P39551	298 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	COA1	P40452	197 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	COX16	P47081	118 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	YJR054W	P47114	497 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	LIA1	P47120	325 aa	Known RBP	2.96	□□□□□ -1.94
ECM18	YDR125C	YLR177W	Q06251	628 aa		2.96	□□□□□ -1.94
ECM18	YDR125C	SLF1	Q12034	447 aa	Known RBP	2.96	□□□□□ -1.94
ECM18	YDR125C	CFT1	Q06632	1357 aa	Known RBP	2.96	□□□□□ -1.94
ECM18	YDR125C	ARG80	P07249	177 aa		2.95	□□□□□ -1.94
ECM18	YDR125C	HPR1	P17629	752 aa	Known RBP	2.95	□□□□□ -1.94
ECM18	YDR125C	MRPL25	P23369	157 aa		2.95	□□□□□ -1.94
ECM18	YDR125C	MSN4	P33749	630 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 72 ms