RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C TAF6P53040 516 aa1.9□□□□□ -2.11
AFR1YDR085C CUE3P53137 624 aaKnown RBP1.9□□□□□ -2.11
AFR1YDR085C ACT1P60010 375 aaKnown RBP1.9□□□□□ -2.11
AFR1YDR085C RDL2Q08742 149 aaKnown RBP1.9□□□□□ -2.11
AFR1YDR085C SGT2Q12118 346 aaKnown RBP1.9□□□□□ -2.11
AFR1YDR085C YPR063CQ12160 140 aa1.9□□□□□ -2.11
AFR1YDR085C TRM10Q12400 293 aa1.9□□□□□ -2.11
AFR1YDR085C TAL1P15019 335 aaKnown RBP1.89□□□□□ -2.11
AFR1YDR085C PPQ1P32945 549 aa1.89□□□□□ -2.11
AFR1YDR085C ASP1P38986 381 aaPredicted RBP1.89□□□□□ -2.11
AFR1YDR085C DXO1Q06349 442 aa1.89□□□□□ -2.11
AFR1YDR085C DTD1Q07648 150 aaKnown RBP1.89□□□□□ -2.11
AFR1YDR085C PML1Q07930 204 aaPredicted RBP1.89□□□□□ -2.11
AFR1YDR085C TFC7Q12415 435 aa1.89□□□□□ -2.11
AFR1YDR085C RBK1P25332 333 aa1.88□□□□□ -2.11
AFR1YDR085C UTR5P32630 166 aa1.88□□□□□ -2.11
AFR1YDR085C CTM1P38818 585 aa1.88□□□□□ -2.11
AFR1YDR085C YFR045WP43617 309 aa1.88□□□□□ -2.11
AFR1YDR085C HSH155P49955 971 aaKnown RBP1.88□□□□□ -2.11
AFR1YDR085C YGL088WP53151 121 aa1.88□□□□□ -2.11
AFR1YDR085C YNL146WP53906 100 aa1.88□□□□□ -2.11
AFR1YDR085C CSI1Q04368 295 aa1.88□□□□□ -2.11
AFR1YDR085C MEI5P32489 222 aa1.88□□□□□ -2.11
AFR1YDR085C MED8P38304 223 aa1.88□□□□□ -2.11
AFR1YDR085C PET8P38921 284 aa1.88□□□□□ -2.11
AFR1YDR085C SHE4P51534 789 aa1.88□□□□□ -2.11
AFR1YDR085C YGL114WP53134 725 aa1.88□□□□□ -2.11
AFR1YDR085C YLR012CQ07927 99 aa1.88□□□□□ -2.11
AFR1YDR085C YDR262WQ12331 272 aa1.88□□□□□ -2.11
AFR1YDR085C MIG1P27705 504 aa1.87□□□□□ -2.11
AFR1YDR085C VMA5P31412 392 aaKnown RBP1.87□□□□□ -2.11
AFR1YDR085C FYV8P46949 817 aaKnown RBP1.87□□□□□ -2.11
AFR1YDR085C YNR066CP53752 436 aa1.87□□□□□ -2.11
AFR1YDR085C YPL113CQ02961 396 aa1.87□□□□□ -2.11
AFR1YDR085C YPL245WQ12179 454 aaKnown RBP1.87□□□□□ -2.11
AFR1YDR085C ERP3Q12403 225 aa1.87□□□□□ -2.11
AFR1YDR085C SCC4P40090 624 aa1.86□□□□□ -2.11
AFR1YDR085C PDR16P53860 351 aaKnown RBP1.86□□□□□ -2.11
AFR1YDR085C RVB1Q03940 463 aaKnown RBP1.86□□□□□ -2.11
AFR1YDR085C PSY3Q12318 242 aa1.86□□□□□ -2.11
AFR1YDR085C CBP2P03874 630 aaPredicted RBP1.86□□□□□ -2.11
AFR1YDR085C MET2P08465 486 aa1.86□□□□□ -2.11
AFR1YDR085C ACB1P31787 87 aa1.86□□□□□ -2.11
AFR1YDR085C BUD13P46947 266 aaPredicted RBP1.86□□□□□ -2.11
AFR1YDR085C YNL040WP53960 456 aaPredicted RBP1.86□□□□□ -2.11
AFR1YDR085C UBX2Q04228 584 aa1.86□□□□□ -2.11
AFR1YDR085C IES3Q12345 250 aa1.86□□□□□ -2.11
AFR1YDR085C TDH2P00358 332 aaKnown RBP1.85□□□□□ -2.11
AFR1YDR085C TDH3P00359 332 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
AFR1YDR085C CDC42P19073 191 aa1.85□□□□□ -2.11
AFR1YDR085C YEL043WP32618 956 aa1.85□□□□□ -2.11
AFR1YDR085C EDC2P40023 145 aaPredicted RBP1.85□□□□□ -2.11
AFR1YDR085C RLP24Q07915 199 aaKnown RBP1.85□□□□□ -2.11
AFR1YDR085C SUR1P33300 382 aa1.84□□□□□ -2.11
AFR1YDR085C CSE1P33307 960 aa1.84□□□□□ -2.11
AFR1YDR085C APE4P38821 490 aa1.84□□□□□ -2.11
AFR1YDR085C LIN1P38852 340 aaPredicted RBP1.84□□□□□ -2.11
AFR1YDR085C YFL040WP43562 540 aa1.84□□□□□ -2.11
AFR1YDR085C ECO1P43605 281 aa1.84□□□□□ -2.11
AFR1YDR085C BUR2Q05949 395 aa1.84□□□□□ -2.11
AFR1YDR085C YOR292CQ08743 309 aa1.84□□□□□ -2.11
AFR1YDR085C NAS2P40555 220 aa1.84□□□□□ -2.12
AFR1YDR085C UFD1P53044 361 aa1.84□□□□□ -2.12
AFR1YDR085C YPL080CQ02826 108 aa1.84□□□□□ -2.12
AFR1YDR085C ERD1P16151 362 aa1.83□□□□□ -2.12
AFR1YDR085C KRE1P17260 313 aa1.83□□□□□ -2.12
AFR1YDR085C PRE7P23724 241 aaKnown RBP1.83□□□□□ -2.12
AFR1YDR085C SOP4P39543 234 aaPredicted RBP1.83□□□□□ -2.12
AFR1YDR085C YGR016WP53209 190 aa1.83□□□□□ -2.12
AFR1YDR085C MIX17Q03667 156 aa1.83□□□□□ -2.12
AFR1YDR085C YDR114CQ04597 100 aa1.83□□□□□ -2.12
AFR1YDR085C CLP1Q08685 445 aaPredicted RBP1.83□□□□□ -2.12
AFR1YDR085C RNR2P09938 399 aaKnown RBP1.82□□□□□ -2.12
AFR1YDR085C VPH2P32341 215 aa1.82□□□□□ -2.12
AFR1YDR085C YER084WP40057 128 aa1.82□□□□□ -2.12
AFR1YDR085C YGR168CP53293 376 aa1.82□□□□□ -2.12
AFR1YDR085C SEC13Q04491 297 aaKnown RBP1.82□□□□□ -2.12
AFR1YDR085C MRX4Q12467 430 aa1.82□□□□□ -2.12
AFR1YDR085C RPL18AP0CX49 186 aaKnown RBP1.82□□□□□ -2.12
AFR1YDR085C RPL18BP0CX50 186 aaKnown RBP1.82□□□□□ -2.12
AFR1YDR085C GPX1P36014 167 aa1.82□□□□□ -2.12
AFR1YDR085C YKR032WP36127 104 aa1.82□□□□□ -2.12
AFR1YDR085C AIM29P36154 155 aa1.82□□□□□ -2.12
AFR1YDR085C IRC4Q03036 179 aa1.82□□□□□ -2.12
AFR1YDR085C VIK1Q12045 647 aa1.82□□□□□ -2.12
AFR1YDR085C GAL3P13045 520 aa1.81□□□□□ -2.12
AFR1YDR085C RSA4P25382 515 aaKnown RBP1.81□□□□□ -2.12
AFR1YDR085C SNX41Q04053 625 aa1.81□□□□□ -2.12
AFR1YDR085C STE23Q06010 1027 aa1.81□□□□□ -2.12
AFR1YDR085C FEX1Q08913 375 aa1.81□□□□□ -2.12
AFR1YDR085C FEX2Q08991 375 aa1.81□□□□□ -2.12
AFR1YDR085C YOL163WP0CF20 169 aa1.8□□□□□ -2.12
AFR1YDR085C UIP5P36137 443 aa1.8□□□□□ -2.12
AFR1YDR085C YHL044WP38727 235 aa1.8□□□□□ -2.12
AFR1YDR085C INA22P40576 216 aa1.8□□□□□ -2.12
AFR1YDR085C YAL063C-AQ3E791 96 aa1.8□□□□□ -2.12
AFR1YDR085C YAK1P14680 807 aa1.8□□□□□ -2.12
AFR1YDR085C SMI1P32566 505 aa1.8□□□□□ -2.12
AFR1YDR085C YKL162CP36052 402 aa1.8□□□□□ -2.12
AFR1YDR085C YBR062CP38239 180 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms