RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C LSG1P53145 640 aaKnown RBP3.84□□□□□ -1.79
CDC9YDL164C YNL095CP53932 642 aa3.84□□□□□ -1.79
CDC9YDL164C RRP17Q04031 235 aaPredicted RBP3.84□□□□□ -1.79
CDC9YDL164C THI7Q05998 598 aa3.84□□□□□ -1.79
CDC9YDL164C THI20Q08224 551 aa3.84□□□□□ -1.79
CDC9YDL164C TAF10Q12030 206 aa3.84□□□□□ -1.79
CDC9YDL164C HIR3P47171 1648 aa3.84□□□□□ -1.79
CDC9YDL164C YPK9Q12697 1472 aa3.84□□□□□ -1.79
CDC9YDL164C HIS1P00498 297 aaKnown RBP3.84□□□□□ -1.79
CDC9YDL164C CAP2P13517 287 aa3.84□□□□□ -1.79
CDC9YDL164C FBA1P14540 359 aaKnown RBP3.84□□□□□ -1.79
CDC9YDL164C RBK1P25332 333 aa3.84□□□□□ -1.79
CDC9YDL164C DEP1P31385 405 aa3.84□□□□□ -1.79
CDC9YDL164C PUB1P32588 453 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
CDC9YDL164C MCH2P36032 473 aa3.84□□□□□ -1.79
CDC9YDL164C NBP35P52920 328 aa3.84□□□□□ -1.79
CDC9YDL164C GOR1P53839 350 aa3.84□□□□□ -1.79
CDC9YDL164C YNL181WP53878 407 aa3.84□□□□□ -1.79
CDC9YDL164C TRM44Q02648 567 aaKnown RBP3.84□□□□□ -1.79
CDC9YDL164C SNO1Q03144 224 aa3.84□□□□□ -1.79
CDC9YDL164C MFG1Q07684 458 aa3.84□□□□□ -1.79
CDC9YDL164C ESA1Q08649 445 aa3.84□□□□□ -1.79
CDC9YDL164C ERP3Q12403 225 aa3.84□□□□□ -1.79
CDC9YDL164C CBS2P14905 389 aa3.83□□□□□ -1.8
CDC9YDL164C URA6P15700 204 aa3.83□□□□□ -1.8
CDC9YDL164C YEF1P32622 495 aa3.83□□□□□ -1.8
CDC9YDL164C YKL063CP35725 167 aa3.83□□□□□ -1.8
CDC9YDL164C FRE2P36033 711 aa3.83□□□□□ -1.8
CDC9YDL164C YKL075CP36083 450 aa3.83□□□□□ -1.8
CDC9YDL164C YBP1P38315 674 aa3.83□□□□□ -1.8
CDC9YDL164C VPS52P39904 641 aa3.83□□□□□ -1.8
CDC9YDL164C THO1P40040 218 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C SER33P40510 469 aa3.83□□□□□ -1.8
CDC9YDL164C ADO1P47143 340 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C MNN10P50108 393 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C ORC5P50874 479 aa3.83□□□□□ -1.8
CDC9YDL164C STP1Q00947 519 aa3.83□□□□□ -1.8
CDC9YDL164C YPL077CQ02831 240 aa3.83□□□□□ -1.8
CDC9YDL164C ATG17Q06410 417 aa3.83□□□□□ -1.8
CDC9YDL164C RDL1Q12305 139 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C MEX67Q99257 599 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C REP1P03871 373 aa3.83□□□□□ -1.8
CDC9YDL164C SNC1P31109 117 aa3.83□□□□□ -1.8
CDC9YDL164C ACB1P31787 87 aa3.83□□□□□ -1.8
CDC9YDL164C SGE1P33335 543 aa3.83□□□□□ -1.8
CDC9YDL164C YPT52P36018 234 aaKnown RBP3.83□□□□□ -1.8
CDC9YDL164C COG3P40094 801 aa3.83□□□□□ -1.8
CDC9YDL164C IDP2P41939 412 aa3.83□□□□□ -1.8
CDC9YDL164C TAD2P47058 250 aa3.83□□□□□ -1.8
CDC9YDL164C GET1P53192 235 aa3.83□□□□□ -1.8
CDC9YDL164C SYF2P53277 215 aaPredicted RBP3.83□□□□□ -1.8
CDC9YDL164C SPR6Q01684 191 aa3.83□□□□□ -1.8
CDC9YDL164C KIN4Q01919 800 aa3.83□□□□□ -1.8
CDC9YDL164C YML096WQ04489 525 aa3.83□□□□□ -1.8
CDC9YDL164C DXO1Q06349 442 aa3.83□□□□□ -1.8
CDC9YDL164C SSK1Q07084 712 aa3.83□□□□□ -1.8
CDC9YDL164C YLR012CQ07927 99 aa3.83□□□□□ -1.8
CDC9YDL164C YAP7Q08182 245 aa3.83□□□□□ -1.8
CDC9YDL164C TMS1Q12116 473 aa3.83□□□□□ -1.8
CDC9YDL164C POM33Q12164 279 aa3.83□□□□□ -1.8
CDC9YDL164C TAF2P23255 1407 aa3.83□□□□□ -1.8
CDC9YDL164C MYO4P32492 1471 aa3.82□□□□□ -1.8
CDC9YDL164C PAB1P04147 577 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CDC9YDL164C DPB2P24482 689 aaPredicted RBP3.82□□□□□ -1.8
CDC9YDL164C UBC8P28263 218 aa3.82□□□□□ -1.8
CDC9YDL164C ZRT1P32804 376 aa3.82□□□□□ -1.8
CDC9YDL164C CSE1P33307 960 aa3.82□□□□□ -1.8
CDC9YDL164C YKR041WP36134 250 aa3.82□□□□□ -1.8
CDC9YDL164C ECM8P38246 354 aa3.82□□□□□ -1.8
CDC9YDL164C HAT2P39984 401 aa3.82□□□□□ -1.8
CDC9YDL164C YJR149WP47177 404 aa3.82□□□□□ -1.8
CDC9YDL164C TOS8P53147 276 aa3.82□□□□□ -1.8
CDC9YDL164C VHT1P53241 593 aa3.82□□□□□ -1.8
CDC9YDL164C CPD1P53314 239 aa3.82□□□□□ -1.8
CDC9YDL164C SWS2P53937 143 aa3.82□□□□□ -1.8
CDC9YDL164C AAT1Q01802 451 aa3.82□□□□□ -1.8
CDC9YDL164C YMR206WQ03695 313 aa3.82□□□□□ -1.8
CDC9YDL164C YOR389WQ08912 624 aa3.82□□□□□ -1.8
CDC9YDL164C CMK2P22517 447 aa3.82□□□□□ -1.8
CDC9YDL164C CPR3P25719 182 aa3.82□□□□□ -1.8
CDC9YDL164C HRR25P29295 494 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C BMH1P29311 267 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C TOD6P34219 525 aa3.82□□□□□ -1.8
CDC9YDL164C SRY1P36007 326 aa3.82□□□□□ -1.8
CDC9YDL164C YBR062CP38239 180 aa3.82□□□□□ -1.8
CDC9YDL164C YHK8P38776 514 aa3.82□□□□□ -1.8
CDC9YDL164C RBG1P39729 369 aa3.82□□□□□ -1.8
CDC9YDL164C PAC2P39937 518 aa3.82□□□□□ -1.8
CDC9YDL164C RPH1P39956 796 aa3.82□□□□□ -1.8
CDC9YDL164C RPL10P41805 221 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C TES1P41903 349 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C UBC13P52490 153 aa3.82□□□□□ -1.8
CDC9YDL164C CAF40P53829 373 aa3.82□□□□□ -1.8
CDC9YDL164C RNY1Q02933 434 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C DAP1Q12091 152 aa3.82□□□□□ -1.8
CDC9YDL164C ACF2Q12168 779 aa3.82□□□□□ -1.8
CDC9YDL164C USB1Q12208 290 aaKnown RBP3.82□□□□□ -1.8
CDC9YDL164C YGK3Q12222 375 aaPredicted RBP3.82□□□□□ -1.8
CDC9YDL164C DSF1P0CX08 502 aa3.81□□□□□ -1.8
CDC9YDL164C YNR073CP0CX09 502 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms