RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	KTI12	P34253	313 aa	Known RBP	0.56	□□□□□ -2.32
HMRA1	YCR097W	MPS2	P53159	387 aa		0.56	□□□□□ -2.32
HMRA1	YCR097W	COS6	P53344	381 aa		0.56	□□□□□ -2.32
HMRA1	YCR097W	SLM2	P53955	656 aa		0.56	□□□□□ -2.32
HMRA1	YCR097W	GRH1	Q04410	372 aa	Known RBP	0.56	□□□□□ -2.32
HMRA1	YCR097W	AIM33	Q04516	312 aa		0.56	□□□□□ -2.32
HMRA1	YCR097W	RPS16A	P0CX51	143 aa	Known RBP	0.55	□□□□□ -2.32
HMRA1	YCR097W	RPS16B	P0CX52	143 aa	Known RBP	0.55	□□□□□ -2.32
HMRA1	YCR097W	DPM1	P14020	267 aa	Known RBP	0.55	□□□□□ -2.32
HMRA1	YCR097W	PDX1	P16451	410 aa		0.55	□□□□□ -2.32
HMRA1	YCR097W	SMP3	Q04174	516 aa		0.55	□□□□□ -2.32
HMRA1	YCR097W	YDL121C	Q07541	149 aa		0.55	□□□□□ -2.32
HMRA1	YCR097W	EMC6	Q12431	108 aa		0.55	□□□□□ -2.32
HMRA1	YCR097W	FSH3	Q99369	266 aa		0.55	□□□□□ -2.32
HMRA1	YCR097W	TRM7	P38238	310 aa	Known RBP	0.54	□□□□□ -2.32
HMRA1	YCR097W	CIK1	Q01649	594 aa		0.54	□□□□□ -2.32
HMRA1	YCR097W	RMT2	Q03305	412 aa		0.54	□□□□□ -2.32
HMRA1	YCR097W	ARF2	P19146	181 aa	Known RBP	0.53	□□□□□ -2.32
HMRA1	YCR097W	SUR1	P33300	382 aa		0.53	□□□□□ -2.32
HMRA1	YCR097W	TDH1	P00360	332 aa	Known RBP	0.52	□□□□□ -2.33
HMRA1	YCR097W	RSM27	P53305	110 aa		0.52	□□□□□ -2.33
HMRA1	YCR097W	APC5	Q08683	685 aa		0.52	□□□□□ -2.33
HMRA1	YCR097W	RPC53	P25441	422 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	BUD2	P33314	1104 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	MMS21	P38632	267 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	YHR045W	P38775	560 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	MLH1	P38920	769 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	FYV8	P46949	817 aa	Known RBP	0.51	□□□□□ -2.33
HMRA1	YCR097W	GPM3	Q12326	303 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	BOL1	Q3E793	110 aa		0.51	□□□□□ -2.33
HMRA1	YCR097W	VPH2	P32341	215 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	COY1	P34237	679 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	AIM29	P36154	155 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	SNL1	P40548	159 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	SYS1	P41544	203 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	YNR066C	P53752	436 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	CTS2	Q06350	511 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	MRX9	Q07349	420 aa	Known RBP	0.5	□□□□□ -2.33
HMRA1	YCR097W	PEX27	Q08580	376 aa		0.5	□□□□□ -2.33
HMRA1	YCR097W	YPL245W	Q12179	454 aa	Known RBP	0.5	□□□□□ -2.33
HMRA1	YCR097W	PSO2	P30620	661 aa		0.49	□□□□□ -2.33
HMRA1	YCR097W	AYR1	P40471	297 aa		0.49	□□□□□ -2.33
HMRA1	YCR097W	PRM4	Q12498	284 aa		0.49	□□□□□ -2.33
HMRA1	YCR097W	REP1	P03871	373 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	CKI1	P20485	582 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	ERG9	P29704	444 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	YBL028C	P38202	106 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	MND1	P53102	219 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	YGR266W	P53326	701 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	NAT4	Q04751	285 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	DTD1	Q07648	150 aa	Known RBP	0.48	□□□□□ -2.33
HMRA1	YCR097W	AGC1	Q12482	902 aa		0.48	□□□□□ -2.33
HMRA1	YCR097W	GRR1	P24814	1151 aa		0.47	□□□□□ -2.33
HMRA1	YCR097W	YOR062C	P36025	268 aa		0.47	□□□□□ -2.33
HMRA1	YCR097W	HCH1	P53834	153 aa		0.47	□□□□□ -2.33
HMRA1	YCR097W	ARC18	Q05933	178 aa	Known RBP	0.47	□□□□□ -2.33
HMRA1	YCR097W	AIM45	Q12480	344 aa	Known RBP	0.47	□□□□□ -2.33
HMRA1	YCR097W	YPL247C	Q12523	523 aa		0.47	□□□□□ -2.33
HMRA1	YCR097W	YAL063C-A	Q3E791	96 aa		0.46	□□□□□ -2.34
HMRA1	YCR097W	INH1	P01097	85 aa		0.45	□□□□□ -2.34
HMRA1	YCR097W	RPL1A	P0CX43	217 aa	Known RBP	0.45	□□□□□ -2.34
HMRA1	YCR097W	RPL1B	P0CX44	217 aa	Known RBP	0.45	□□□□□ -2.34
HMRA1	YCR097W	UTR1	P21373	530 aa		0.45	□□□□□ -2.34
HMRA1	YCR097W	RSC1	P53236	928 aa		0.45	□□□□□ -2.34
HMRA1	YCR097W	YOR292C	Q08743	309 aa		0.45	□□□□□ -2.34
HMRA1	YCR097W	RAD1	P06777	1100 aa		0.44	□□□□□ -2.34
HMRA1	YCR097W	SPS100	P13130	326 aa		0.44	□□□□□ -2.34
HMRA1	YCR097W	MXR2	P25566	168 aa		0.44	□□□□□ -2.34
HMRA1	YCR097W	PET8	P38921	284 aa		0.44	□□□□□ -2.34
HMRA1	YCR097W	MRPL49	P40858	161 aa	Predicted RBP	0.44	□□□□□ -2.34
HMRA1	YCR097W	DSE2	P38844	325 aa		0.43	□□□□□ -2.34
HMRA1	YCR097W	UTP25	P40498	721 aa	Known RBP	0.43	□□□□□ -2.34
HMRA1	YCR097W	VIK1	Q12045	647 aa		0.43	□□□□□ -2.34
HMRA1	YCR097W	YCR102C	P25608	368 aa		0.42	□□□□□ -2.34
HMRA1	YCR097W	IML3	P38265	245 aa		0.42	□□□□□ -2.34
HMRA1	YCR097W	PES4	P39684	611 aa		0.42	□□□□□ -2.34
HMRA1	YCR097W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
HMRA1	YCR097W	SEC13	Q04491	297 aa	Known RBP	0.42	□□□□□ -2.34
HMRA1	YCR097W	FCF1	Q05498	189 aa	Predicted RBP	0.42	□□□□□ -2.34
HMRA1	YCR097W	CDC13	P32797	924 aa	Known RBP	0.41	□□□□□ -2.34
HMRA1	YCR097W	SRB7	P47822	140 aa		0.41	□□□□□ -2.34
HMRA1	YCR097W	LIF1	P53150	421 aa		0.41	□□□□□ -2.34
HMRA1	YCR097W	NNT1	Q05874	261 aa		0.41	□□□□□ -2.34
HMRA1	YCR097W	SPE3	Q12074	293 aa	Known RBP	0.41	□□□□□ -2.34
HMRA1	YCR097W	SFG1	Q12507	346 aa		0.41	□□□□□ -2.34
HMRA1	YCR097W	YOL162W	P0CF19	215 aa		0.4	□□□□□ -2.35
HMRA1	YCR097W	MBA1	P38300	278 aa		0.4	□□□□□ -2.35
HMRA1	YCR097W	COG3	P40094	801 aa		0.4	□□□□□ -2.35
HMRA1	YCR097W	RDL2	Q08742	149 aa	Known RBP	0.4	□□□□□ -2.35
HMRA1	YCR097W	MRPL6	P32904	214 aa		0.39	□□□□□ -2.35
HMRA1	YCR097W	YFL064C	P43540	174 aa		0.39	□□□□□ -2.35
HMRA1	YCR097W	OST3	P48439	350 aa		0.39	□□□□□ -2.35
HMRA1	YCR097W	TVP15	Q03860	143 aa		0.39	□□□□□ -2.35
HMRA1	YCR097W	RAD10	P06838	210 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	DCC1	P25559	380 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	ATG15	P25641	520 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	SPL2	P38839	148 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	YER135C	P40082	130 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	NUP49	Q02199	472 aa		0.38	□□□□□ -2.35
HMRA1	YCR097W	YOR268C	Q08734	132 aa		0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms