RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W TAZ1Q06510 381 aa7.29□□□□□ -1.24
ABP1YCR088W CYK3Q07533 885 aa7.29□□□□□ -1.24
ABP1YCR088W MMT2Q08970 484 aa7.29□□□□□ -1.24
ABP1YCR088W FEX2Q08991 375 aa7.29□□□□□ -1.24
ABP1YCR088W PSF1Q12488 208 aa7.29□□□□□ -1.24
ABP1YCR088W YKL033W-AQ86ZR7 236 aa7.29□□□□□ -1.24
ABP1YCR088W NAG1Q8TGN9 163 aa7.29□□□□□ -1.24
ABP1YCR088W MRP1P10662 321 aaKnown RBP7.28□□□□□ -1.24
ABP1YCR088W AAC3P18238 307 aa7.28□□□□□ -1.24
ABP1YCR088W HOP1P20050 605 aa7.28□□□□□ -1.24
ABP1YCR088W ERG24P32462 438 aaKnown RBP7.28□□□□□ -1.24
ABP1YCR088W OMA1P36163 345 aa7.28□□□□□ -1.24
ABP1YCR088W MAL32P38158 584 aa7.28□□□□□ -1.24
ABP1YCR088W HRB1P38922 454 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
ABP1YCR088W YER184CP39961 794 aa7.28□□□□□ -1.24
ABP1YCR088W PMT6P42934 759 aa7.28□□□□□ -1.24
ABP1YCR088W IDS2P46958 469 aa7.28□□□□□ -1.24
ABP1YCR088W MAL12P53341 584 aa7.28□□□□□ -1.24
ABP1YCR088W MLC2Q06580 163 aa7.28□□□□□ -1.24
ABP1YCR088W QCR7P00128 127 aa7.28□□□□□ -1.24
ABP1YCR088W SPT15P13393 240 aaKnown RBP7.28□□□□□ -1.24
ABP1YCR088W CDC23P16522 626 aa7.28□□□□□ -1.24
ABP1YCR088W MCK1P21965 375 aaKnown RBP7.28□□□□□ -1.24
ABP1YCR088W NRP1P32770 719 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
ABP1YCR088W WBP1P33767 430 aaKnown RBP7.28□□□□□ -1.24
ABP1YCR088W MRPL37P36532 105 aa7.28□□□□□ -1.24
ABP1YCR088W PEX32P38292 413 aa7.28□□□□□ -1.24
ABP1YCR088W YDR249CQ03787 373 aa7.28□□□□□ -1.24
ABP1YCR088W BMT6Q12291 365 aa7.28□□□□□ -1.24
ABP1YCR088W ARG80P07249 177 aa7.27□□□□□ -1.25
ABP1YCR088W PRB1P09232 635 aa7.27□□□□□ -1.25
ABP1YCR088W GPI12P23797 304 aa7.27□□□□□ -1.25
ABP1YCR088W CAM1P29547 415 aaKnown RBP7.27□□□□□ -1.25
ABP1YCR088W MKS1P34072 584 aa7.27□□□□□ -1.25
ABP1YCR088W CHS7P38843 316 aa7.27□□□□□ -1.25
ABP1YCR088W ICE2P40499 491 aa7.27□□□□□ -1.25
ABP1YCR088W MID1P41821 548 aa7.27□□□□□ -1.25
ABP1YCR088W SIZ1Q04195 904 aa7.27□□□□□ -1.25
ABP1YCR088W YOR378WQ08902 515 aa7.27□□□□□ -1.25
ABP1YCR088W AEP3Q12089 606 aa7.27□□□□□ -1.25
ABP1YCR088W DET1Q99288 334 aaKnown RBP7.27□□□□□ -1.25
ABP1YCR088W RED1P14291 827 aa7.26□□□□□ -1.25
ABP1YCR088W CNB1P25296 175 aa7.26□□□□□ -1.25
ABP1YCR088W MGR1P25573 417 aa7.26□□□□□ -1.25
ABP1YCR088W FUN19P28003 413 aaPredicted RBP7.26□□□□□ -1.25
ABP1YCR088W CDC13P32797 924 aaKnown RBP7.26□□□□□ -1.25
ABP1YCR088W PPG1P32838 368 aa7.26□□□□□ -1.25
ABP1YCR088W VPS17P32913 551 aa7.26□□□□□ -1.25
ABP1YCR088W MDL1P33310 695 aa7.26□□□□□ -1.25
ABP1YCR088W GPG1P53130 126 aa7.26□□□□□ -1.25
ABP1YCR088W TDA7P53882 636 aaPredicted RBP7.26□□□□□ -1.25
ABP1YCR088W KAP120Q02932 1032 aa7.26□□□□□ -1.25
ABP1YCR088W TY1A-MR1Q04215 440 aa7.26□□□□□ -1.25
ABP1YCR088W UTP15Q04305 513 aaKnown RBP7.26□□□□□ -1.25
ABP1YCR088W SEC13Q04491 297 aaKnown RBP7.26□□□□□ -1.25
ABP1YCR088W YOR365CQ08844 703 aa7.26□□□□□ -1.25
ABP1YCR088W ATP16Q12165 160 aa7.26□□□□□ -1.25
ABP1YCR088W YOL107WQ12239 342 aa7.26□□□□□ -1.25
ABP1YCR088W TY1A-BLQ12266 440 aa7.26□□□□□ -1.25
ABP1YCR088W TY1A-DR3Q12441 440 aa7.26□□□□□ -1.25
ABP1YCR088W YHR213W-AQ8TGT4 77 aa7.26□□□□□ -1.25
ABP1YCR088W SCL1P21243 252 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W YCR061WP25639 631 aa7.25□□□□□ -1.25
ABP1YCR088W NAM9P27929 486 aa7.25□□□□□ -1.25
ABP1YCR088W ITR1P30605 584 aa7.25□□□□□ -1.25
ABP1YCR088W SFA1P32771 386 aa7.25□□□□□ -1.25
ABP1YCR088W SFK1P35735 353 aa7.25□□□□□ -1.25
ABP1YCR088W ANS1P38832 159 aa7.25□□□□□ -1.25
ABP1YCR088W ZIM17P42844 174 aa7.25□□□□□ -1.25
ABP1YCR088W TAD2P47058 250 aa7.25□□□□□ -1.25
ABP1YCR088W VHT1P53241 593 aa7.25□□□□□ -1.25
ABP1YCR088W TPC1P53257 314 aa7.25□□□□□ -1.25
ABP1YCR088W YNR062CP53748 327 aa7.25□□□□□ -1.25
ABP1YCR088W HXT11P54862 567 aa7.25□□□□□ -1.25
ABP1YCR088W TY1A-DR2Q03964 440 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W YDR444WQ04093 687 aa7.25□□□□□ -1.25
ABP1YCR088W XYL2Q07993 356 aa7.25□□□□□ -1.25
ABP1YCR088W OPI10Q08202 246 aa7.25□□□□□ -1.25
ABP1YCR088W GUP2Q08929 609 aa7.25□□□□□ -1.25
ABP1YCR088W FMP40Q08968 688 aaPredicted RBP7.25□□□□□ -1.25
ABP1YCR088W FUS3P16892 353 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W HXT2P23585 541 aa7.25□□□□□ -1.25
ABP1YCR088W RNQ1P25367 405 aa7.25□□□□□ -1.25
ABP1YCR088W CNE1P27825 502 aa7.25□□□□□ -1.25
ABP1YCR088W PRE2P30656 287 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W SRB5P32585 307 aa7.25□□□□□ -1.25
ABP1YCR088W FMP46P36141 133 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W ALG3P38179 458 aa7.25□□□□□ -1.25
ABP1YCR088W GIP2P40036 548 aa7.25□□□□□ -1.25
ABP1YCR088W HIS6P40545 261 aa7.25□□□□□ -1.25
ABP1YCR088W ALB1P47019 175 aaPredicted RBP7.25□□□□□ -1.25
ABP1YCR088W LYS20P48570 428 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W YGL235WP53071 178 aa7.25□□□□□ -1.25
ABP1YCR088W YGR042WP53227 271 aa7.25□□□□□ -1.25
ABP1YCR088W BUD25P85052 153 aa7.25□□□□□ -1.25
ABP1YCR088W TIM44Q01852 431 aa7.25□□□□□ -1.25
ABP1YCR088W SSY1Q03770 852 aa7.25□□□□□ -1.25
ABP1YCR088W DCR2Q05924 578 aa7.25□□□□□ -1.25
ABP1YCR088W SNT309Q06091 175 aaPredicted RBP7.25□□□□□ -1.25
ABP1YCR088W BRX1Q08235 291 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms