RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W MUP3P38734 546 aa4.33□□□□□ -1.72
VHC1YBR235W GWT1P47026 490 aa4.33□□□□□ -1.72
VHC1YBR235W TAH11P47112 604 aa4.33□□□□□ -1.72
VHC1YBR235W IBA57P47158 497 aa4.33□□□□□ -1.72
VHC1YBR235W TRM9P49957 279 aa4.33□□□□□ -1.72
VHC1YBR235W YGR035CP53222 116 aa4.33□□□□□ -1.72
VHC1YBR235W YNR029CP53729 429 aaKnown RBP4.33□□□□□ -1.72
VHC1YBR235W YPL014WQ02606 381 aa4.33□□□□□ -1.72
VHC1YBR235W RCR2Q03446 210 aaKnown RBP4.33□□□□□ -1.72
VHC1YBR235W PLB2Q03674 706 aa4.33□□□□□ -1.72
VHC1YBR235W YMR155WQ03795 547 aa4.33□□□□□ -1.72
VHC1YBR235W AGE1Q04412 482 aa4.33□□□□□ -1.72
VHC1YBR235W CRF1Q04930 467 aa4.33□□□□□ -1.72
VHC1YBR235W RRP45Q05636 305 aaKnown RBP4.33□□□□□ -1.72
VHC1YBR235W GUD1Q07729 489 aa4.33□□□□□ -1.72
VHC1YBR235W NAT5Q08689 176 aa4.33□□□□□ -1.72
VHC1YBR235W YDL176WQ12027 708 aa4.33□□□□□ -1.72
VHC1YBR235W ISA2Q12425 185 aa4.33□□□□□ -1.72
VHC1YBR235W FKS3Q04952 1785 aa4.33□□□□□ -1.72
VHC1YBR235W ARE1P25628 610 aa4.32□□□□□ -1.72
VHC1YBR235W MIG1P27705 504 aa4.32□□□□□ -1.72
VHC1YBR235W PPG1P32838 368 aa4.32□□□□□ -1.72
VHC1YBR235W SKG6P32900 734 aaPredicted RBP4.32□□□□□ -1.72
VHC1YBR235W YPT53P36019 220 aa4.32□□□□□ -1.72
VHC1YBR235W SDH4P37298 181 aa4.32□□□□□ -1.72
VHC1YBR235W FAT1P38225 669 aa4.32□□□□□ -1.72
VHC1YBR235W ARP1P38696 384 aa4.32□□□□□ -1.72
VHC1YBR235W YHR210CP38893 341 aa4.32□□□□□ -1.72
VHC1YBR235W ALP1P38971 573 aa4.32□□□□□ -1.72
VHC1YBR235W SHO1P40073 367 aa4.32□□□□□ -1.72
VHC1YBR235W YER121WP40076 114 aa4.32□□□□□ -1.72
VHC1YBR235W PRM10P42946 383 aa4.32□□□□□ -1.72
VHC1YBR235W ATG18P43601 500 aa4.32□□□□□ -1.72
VHC1YBR235W FAA4P47912 694 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W ALT2P52892 507 aa4.32□□□□□ -1.72
VHC1YBR235W YGR079WP53249 370 aa4.32□□□□□ -1.72
VHC1YBR235W MET14Q02196 202 aa4.32□□□□□ -1.72
VHC1YBR235W EKI1Q03764 534 aa4.32□□□□□ -1.72
VHC1YBR235W YMR160WQ03823 816 aa4.32□□□□□ -1.72
VHC1YBR235W CUE4Q04201 117 aaPredicted RBP4.32□□□□□ -1.72
VHC1YBR235W BSC6Q08280 497 aa4.32□□□□□ -1.72
VHC1YBR235W POM33Q12164 279 aa4.32□□□□□ -1.72
VHC1YBR235W YOL159C-AQ3E769 90 aa4.32□□□□□ -1.72
VHC1YBR235W TPI1P00942 248 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W PEP4P07267 405 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W ERG20P08524 352 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W SRD1P09007 221 aa4.32□□□□□ -1.72
VHC1YBR235W RPL31AP0C2H8 113 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W RPL31BP0C2H9 113 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W APE1P14904 514 aa4.32□□□□□ -1.72
VHC1YBR235W ERD1P16151 362 aa4.32□□□□□ -1.72
VHC1YBR235W STE50P25344 346 aa4.32□□□□□ -1.72
VHC1YBR235W PUP3P25451 205 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W EHD3P28817 500 aa4.32□□□□□ -1.72
VHC1YBR235W SUA7P29055 345 aaPredicted RBP4.32□□□□□ -1.72
VHC1YBR235W SHE2P36068 246 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
VHC1YBR235W ALY1P36117 915 aa4.32□□□□□ -1.72
VHC1YBR235W TAT1P38085 619 aa4.32□□□□□ -1.72
VHC1YBR235W YBR241CP38142 488 aa4.32□□□□□ -1.72
VHC1YBR235W TRS20P38334 175 aa4.32□□□□□ -1.72
VHC1YBR235W RPF1P38805 295 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W AXL2P38928 823 aa4.32□□□□□ -1.72
VHC1YBR235W YAL037WP39728 267 aa4.32□□□□□ -1.72
VHC1YBR235W RRD1P40454 393 aaKnown RBP4.32□□□□□ -1.72
VHC1YBR235W GDS1P41913 522 aa4.32□□□□□ -1.72
VHC1YBR235W YJL045WP47052 634 aa4.32□□□□□ -1.72
VHC1YBR235W TGL2P54857 326 aa4.32□□□□□ -1.72
VHC1YBR235W VBA1Q04301 562 aa4.32□□□□□ -1.72
VHC1YBR235W YMR034CQ05131 434 aaPredicted RBP4.32□□□□□ -1.72
VHC1YBR235W HRD3Q05787 833 aa4.32□□□□□ -1.72
VHC1YBR235W THI7Q05998 598 aa4.32□□□□□ -1.72
VHC1YBR235W GRE1Q08969 168 aa4.32□□□□□ -1.72
VHC1YBR235W UPC2Q12151 913 aa4.32□□□□□ -1.72
VHC1YBR235W RRI1Q12468 440 aa4.32□□□□□ -1.72
VHC1YBR235W YNR034W-AQ3E841 98 aa4.32□□□□□ -1.72
VHC1YBR235W THP2O13539 261 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W COX5BP00425 151 aa4.31□□□□□ -1.72
VHC1YBR235W SNF6P18888 332 aa4.31□□□□□ -1.72
VHC1YBR235W RPB5P20434 215 aa4.31□□□□□ -1.72
VHC1YBR235W RMA1P36001 430 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W YKL151CP36059 337 aa4.31□□□□□ -1.72
VHC1YBR235W RCK1P38622 512 aa4.31□□□□□ -1.72
VHC1YBR235W YHR035WP38769 630 aa4.31□□□□□ -1.72
VHC1YBR235W YIL152WP40455 235 aa4.31□□□□□ -1.72
VHC1YBR235W PAM16P42949 149 aa4.31□□□□□ -1.72
VHC1YBR235W DUO1P53168 247 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W ACT1P60010 375 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W RPS15Q01855 142 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W MED7Q08278 222 aa4.31□□□□□ -1.72
VHC1YBR235W AIM7Q12156 149 aa4.31□□□□□ -1.72
VHC1YBR235W SUL2Q12325 893 aa4.31□□□□□ -1.72
VHC1YBR235W TY1B-NL2Q99337 1749 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W RPS25BP0C0T4 108 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W YCR061WP25639 631 aa4.31□□□□□ -1.72
VHC1YBR235W SYN8P31377 255 aa4.31□□□□□ -1.72
VHC1YBR235W CHS7P38843 316 aa4.31□□□□□ -1.72
VHC1YBR235W FIR1P40020 876 aa4.31□□□□□ -1.72
VHC1YBR235W YJL218WP40892 196 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W THI12P42883 340 aa4.31□□□□□ -1.72
VHC1YBR235W THI5P43534 340 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms