RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C ERP1Q05359 219 aaKnown RBP2.07□□□□□ -2.08
PRP6YBR055C DDC1Q08949 612 aa2.07□□□□□ -2.08
PRP6YBR055C ADF1Q2V2Q1 113 aa2.07□□□□□ -2.08
PRP6YBR055C TSC11P40061 1430 aa2.07□□□□□ -2.08
PRP6YBR055C VPS3P23643 1011 aa2.07□□□□□ -2.08
PRP6YBR055C RPL16AP26784 199 aaKnown RBP2.07□□□□□ -2.08
PRP6YBR055C KRE6P32486 720 aa2.07□□□□□ -2.08
PRP6YBR055C BIG1P38813 335 aa2.07□□□□□ -2.08
PRP6YBR055C COA1P40452 197 aa2.07□□□□□ -2.08
PRP6YBR055C PDR10P51533 1564 aa2.07□□□□□ -2.08
PRP6YBR055C ASR1Q06834 288 aa2.07□□□□□ -2.08
PRP6YBR055C TMS1Q12116 473 aa2.07□□□□□ -2.08
PRP6YBR055C IQG1Q12280 1495 aa2.07□□□□□ -2.08
PRP6YBR055C USO1P25386 1790 aa2.06□□□□□ -2.08
PRP6YBR055C CYC3P06182 269 aa2.06□□□□□ -2.08
PRP6YBR055C MET16P18408 261 aaPredicted RBP2.06□□□□□ -2.08
PRP6YBR055C SEC1P30619 724 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C SPO23P33757 523 aa2.06□□□□□ -2.08
PRP6YBR055C AVT5P38176 459 aa2.06□□□□□ -2.08
PRP6YBR055C MAM33P40513 266 aa2.06□□□□□ -2.08
PRP6YBR055C YIA6P40556 373 aa2.06□□□□□ -2.08
PRP6YBR055C MSS2P40990 351 aa2.06□□□□□ -2.08
PRP6YBR055C LOT6Q07923 191 aa2.06□□□□□ -2.08
PRP6YBR055C SMC5Q08204 1093 aa2.06□□□□□ -2.08
PRP6YBR055C YDL109CQ12103 647 aa2.06□□□□□ -2.08
PRP6YBR055C STU1P38198 1513 aa2.06□□□□□ -2.08
PRP6YBR055C MRP1P10662 321 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C NAM2P11325 894 aa2.06□□□□□ -2.08
PRP6YBR055C SPS100P13130 326 aa2.06□□□□□ -2.08
PRP6YBR055C MCK1P21965 375 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C CBF5P33322 483 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
PRP6YBR055C YHR035WP38769 630 aa2.06□□□□□ -2.08
PRP6YBR055C ALD5P40047 520 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C YJL213WP40896 331 aa2.06□□□□□ -2.08
PRP6YBR055C YAR1P46683 200 aa2.06□□□□□ -2.08
PRP6YBR055C CGR1P53188 120 aa2.06□□□□□ -2.08
PRP6YBR055C OST6Q03723 332 aa2.06□□□□□ -2.08
PRP6YBR055C MYO5Q04439 1219 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C ADH6Q04894 360 aaKnown RBP2.06□□□□□ -2.08
PRP6YBR055C FCY22Q12119 530 aa2.06□□□□□ -2.08
PRP6YBR055C RGT2Q12300 763 aa2.06□□□□□ -2.08
PRP6YBR055C ATG31Q12421 196 aa2.06□□□□□ -2.08
PRP6YBR055C IZH4Q99393 312 aa2.06□□□□□ -2.08
PRP6YBR055C ATP6P00854 259 aa2.05□□□□□ -2.08
PRP6YBR055C ILV1P00927 576 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C RPS14AP06367 137 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C DAL82P21705 255 aa2.05□□□□□ -2.08
PRP6YBR055C RRT12P25381 491 aa2.05□□□□□ -2.08
PRP6YBR055C SRB4P32569 687 aa2.05□□□□□ -2.08
PRP6YBR055C RPS14BP39516 138 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C PRM5P40476 318 aa2.05□□□□□ -2.08
PRP6YBR055C CIN2P46670 268 aa2.05□□□□□ -2.08
PRP6YBR055C SCS3P53012 380 aa2.05□□□□□ -2.08
PRP6YBR055C REX2P54964 269 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C YPR091CQ06833 770 aa2.05□□□□□ -2.08
PRP6YBR055C RPN6Q12377 434 aa2.05□□□□□ -2.08
PRP6YBR055C ICT1Q12385 394 aa2.05□□□□□ -2.08
PRP6YBR055C RPL23AP0CX41 137 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C RPL23BP0CX42 137 aaKnown RBP2.05□□□□□ -2.08
PRP6YBR055C CPR4P25334 318 aa2.05□□□□□ -2.08
PRP6YBR055C CYM1P32898 989 aa2.05□□□□□ -2.08
PRP6YBR055C YIL067CP40514 678 aa2.05□□□□□ -2.08
PRP6YBR055C HAC1P41546 238 aa2.05□□□□□ -2.08
PRP6YBR055C YFL040WP43562 540 aa2.05□□□□□ -2.08
PRP6YBR055C CPD1P53314 239 aa2.05□□□□□ -2.08
PRP6YBR055C PGA2P53903 129 aa2.05□□□□□ -2.08
PRP6YBR055C MTQ1P53944 314 aa2.05□□□□□ -2.08
PRP6YBR055C TRM82Q03774 444 aa2.05□□□□□ -2.08
PRP6YBR055C SNX41Q04053 625 aa2.05□□□□□ -2.08
PRP6YBR055C YPR172WQ06608 200 aa2.05□□□□□ -2.08
PRP6YBR055C PAM18Q07914 168 aa2.05□□□□□ -2.08
PRP6YBR055C YOR387CQ08910 206 aa2.05□□□□□ -2.08
PRP6YBR055C YGK3Q12222 375 aaPredicted RBP2.05□□□□□ -2.08
PRP6YBR055C CDC36P06100 191 aaPredicted RBP2.04□□□□□ -2.08
PRP6YBR055C RPL31AP0C2H8 113 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C MATALPHA1P0CY06 175 aa2.04□□□□□ -2.08
PRP6YBR055C HMLALPHA1P0CY07 175 aa2.04□□□□□ -2.08
PRP6YBR055C ERD1P16151 362 aa2.04□□□□□ -2.08
PRP6YBR055C MER1P16523 270 aa2.04□□□□□ -2.08
PRP6YBR055C HPR1P17629 752 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C CPR3P25719 182 aa2.04□□□□□ -2.08
PRP6YBR055C RPL16BP26785 198 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C YKL063CP35725 167 aa2.04□□□□□ -2.08
PRP6YBR055C RPC37P36121 282 aa2.04□□□□□ -2.08
PRP6YBR055C NDT80P38830 627 aa2.04□□□□□ -2.08
PRP6YBR055C MDM31P38880 579 aa2.04□□□□□ -2.08
PRP6YBR055C OTU1P43558 301 aa2.04□□□□□ -2.08
PRP6YBR055C PMT4P46971 762 aa2.04□□□□□ -2.08
PRP6YBR055C COS10P52924 374 aa2.04□□□□□ -2.08
PRP6YBR055C MRPL50P53724 139 aa2.04□□□□□ -2.08
PRP6YBR055C YPL077CQ02831 240 aa2.04□□□□□ -2.08
PRP6YBR055C GTO3Q04806 366 aa2.04□□□□□ -2.08
PRP6YBR055C RTN1Q04947 295 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C ATG38Q05789 226 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C SLM3Q12093 417 aa2.04□□□□□ -2.08
PRP6YBR055C FRE8Q12209 686 aa2.04□□□□□ -2.08
PRP6YBR055C UTP23Q12339 254 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C SAL1D6W196 494 aa2.04□□□□□ -2.08
PRP6YBR055C TDH2P00358 332 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C REP1P03871 373 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms