RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TSR1Q2NL82 804 aaKnown RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 TBC1D25Q3MII6 688 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 SLC39A11Q8N1S5 342 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 ZDHHC5Q9C0B5 715 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 PLEKHA4Q9H4M7 779 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 SLC38A10Q9HBR0 1119 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 PNMA2Q9UL42 364 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 SLC6A14Q9UN76 642 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 CTDP1Q9Y5B0 961 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 PCDHB15Q9Y5E8 787 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 PCDH15Q96QU1 1955 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 USP9YO00507 2555 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 NUP205Q92621 2012 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 F8P00451 2351 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 A0A1W2PRG0 241 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 CBFA2T3O75081 653 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 CLCN1P35523 988 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 HNF1BP35680 557 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 ATXN3P54252 364 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 FAM193AP78312 1265 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 IRX4P78413 519 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 MGAT3Q09327 533 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 WTAPQ15007 396 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 LMBRD2Q68DH5 695 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 TAF2Q6P1X5 1199 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 RSPH3Q86UC2 560 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 SYT12Q8IV01 421 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 SRRM1Q8IYB3 904 aaKnown RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 LRRC43Q8N309 656 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 BCL7CQ8WUZ0 217 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 ELSPBP1Q96BH3 223 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 ZNF578Q96N58 590 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-213ENST00000639290 TMEM117Q9H0C3 514 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 ANAPC2Q9UJX6 822 aa4.18□□□□□ -1.74
CCDC7-213ENST00000639290 MYH1P12882 1939 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 HEATR9A2RTY3 570 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 INPPL1O15357 1258 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 LRG1P02750 347 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 POLR3DP05423 398 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 EDNRBP24530 442 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PCBP4P57723 403 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 MECOMQ03112 1051 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 APOBRQ0VD83 1088 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 DUOXA1Q1HG43 343 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 KCNT2Q6UVM3 1135 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 DDX53Q86TM3 631 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 RPAP2Q8IXW5 612 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 IRF7Q92985 503 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 GLMNQ92990 594 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 ADNPQ9H2P0 1102 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 A1CFQ9NQ94 594 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 SNRKQ9NRH2 765 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 DONSONQ9NYP3 566 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 FAN1Q9Y2M0 1017 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PCDHB7Q9Y5E2 793 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PCDHGA1Q9Y5H4 931 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 WNT6Q9Y6F9 365 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 LCTP09848 1927 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 ARHGEF17Q96PE2 2063 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 K7ENP7 123 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 GJB3O75712 270 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 C1SP09871 688 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 FSHRP23945 695 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 CASRP41180 1078 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 SLC4A3P48751 1232 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 SHROOM1Q2M3G4 852 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 TRIM61Q5EBN2 209 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 FHL5Q5TD97 284 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 INO80CQ6PI98 192 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PPTC7Q8NI37 304 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 SMG7Q92540 1137 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 NSUN4Q96CB9 384 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 HDAC11Q96DB2 347 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 GAD1Q99259 594 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 TMUB1Q9BVT8 246 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PRKD2Q9BZL6 878 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 PHAXQ9H814 394 aaKnown RBP4.17□□□□□ -1.74
CCDC7-213ENST00000639290 SWAP70Q9UH65 585 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 RIPK3Q9Y572 518 aa4.17□□□□□ -1.74
CCDC7-213ENST00000639290 RELNP78509 3460 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 AHCTF1Q8WYP5 2266 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SERPINF2P08697 491 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ITGB6P18564 788 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SHMT1P34896 483 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CNTN2Q02246 1040 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 GAS6Q14393 721 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 LPIN1Q14693 890 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SEPT2Q15019 361 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 KIAA0753Q2KHM9 967 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CCDC30Q5VVM6 783 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 DUSP27Q5VZP5 1158 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ZNF787Q6DD87 383 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ATG9AQ7Z3C6 839 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 TIPARPQ7Z3E1 657 aaKnown RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SLCO6A1Q86UG4 719 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ERICH1Q86X53 443 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms