RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 USP30Q70CQ3 517 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ADGRE4PQ86SQ3 457 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 HOMER1Q86YM7 354 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 THEMISQ8N1K5 641 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 SH3RF2Q8TEC5 729 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 THAP3Q8WTV1 239 aaPredicted RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 APPBP2Q92624 585 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 SCYL1Q96KG9 808 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 KCNJ15Q99712 375 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 CD244Q9BZW8 370 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 BRINP2Q9C0B6 783 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 FANCLQ9NW38 375 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 TMEM260Q9NX78 707 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ZNHIT2Q9UHR6 403 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ABCC5O15440 1437 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 ZFYVE9O95405 1425 aa3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 XRN1Q8IZH2 1706 aaKnown RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 CHD2O14647 1828 aaKnown RBP3.49□□□□□ -1.85
SMARCB1-208ENST00000634926 LAMC1P11047 1609 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 IQGAP3Q86VI3 1631 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 NRXN3Q9Y4C0 1643 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 RPRD2Q5VT52 1461 aaKnown RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 SETD1AO15047 1707 aaKnown RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 DIP2AQ14689 1571 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 DAPK1P53355 1430 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 FGD6Q6ZV73 1430 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 B2RBV5 119 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 CDC45O75419 566 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 CPP00450 1065 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 HMGCRP04035 888 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 MRE11P49959 708 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 CRHR2Q13324 411 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 EIF4HQ15056 248 aaKnown RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 PTPROQ16827 1216 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 WDR72Q3MJ13 1102 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 MTERF2Q49AM1 385 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 C2orf27AQ580R0 203 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 C6orf15Q6UXA7 325 aaPredicted RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 EEPD1Q7L9B9 569 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 FILIP1Q7Z7B0 1213 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 KIAA0907Q7Z7F0 614 aaPredicted RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 ADGRG3Q86Y34 549 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 KANSL2Q9H9L4 492 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 PRKAB1Q9Y478 270 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 SHPRHQ149N8 1683 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 KIF15Q9NS87 1388 aa3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 AHDC1Q5TGY3 1603 aaPredicted RBP3.48□□□□□ -1.85
SMARCB1-208ENST00000634926 E9PCH4 1651 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 FAM90A27PA6NNH2 459 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 HSPA1LP34931 641 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 SQSTM1Q13501 440 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 LONRF2Q1L5Z9 754 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 MRM1Q6IN84 353 aaKnown RBP3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 C16orf86Q6ZW13 317 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 KCTD1Q719H9 257 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 SPATC1Q76KD6 591 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 SYNPOQ8N3V7 929 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 SHCBP1Q8NEM2 672 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 ZCRB1Q8TBF4 217 aaKnown RBP3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 GPATCH3Q96I76 525 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 EPN3Q9H201 632 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 SLKQ9H2G2 1235 aaPredicted RBP3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 NELFAQ9H3P2 528 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 R3HDMLQ9H3Y0 253 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 PACSIN3Q9UKS6 424 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 NHSL1Q5SYE7 1610 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 TMEM2Q9UHN6 1383 aa3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 ARHGEF17Q96PE2 2063 aaPredicted RBP3.47□□□□□ -1.85
SMARCB1-208ENST00000634926 KDM2BQ8NHM5 1336 aa3.46□□□□□ -1.85
SMARCB1-208ENST00000634926 CFAP65Q6ZU64 1925 aaKnown RBP3.46□□□□□ -1.85
SMARCB1-208ENST00000634926 COL4A3Q01955 1670 aa3.46□□□□□ -1.85
SMARCB1-208ENST00000634926 FAM135BQ49AJ0 1406 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 PRAG1Q86YV5 1406 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 ZAR1LA6NP61 321 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 PPP1R12AO14974 1030 aaPredicted RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 KIF3BO15066 747 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SLC26A4O43511 780 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 DIAPH1O60610 1272 aaKnown RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 IBSPP21815 317 aaPredicted RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 ZFP36P26651 326 aaKnown RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 MC4RP32245 332 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 HHEXQ03014 270 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SSRP1Q08945 709 aaKnown RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 RIN1Q13671 783 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SV2CQ496J9 727 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 GGT6Q6P531 493 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SYCE2Q6PIF2 218 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 OLFML1Q6UWY5 402 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 FEZ1Q99689 392 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 OR10A2Q9H208 303 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SPC25Q9HBM1 224 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 IFT57Q9NWB7 429 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 DSEQ9UL01 958 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 NOP58Q9Y2X3 529 aaKnown RBP3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 SETBP1Q9Y6X0 1596 aa3.46□□□□□ -1.86
SMARCB1-208ENST00000634926 LRP6O75581 1613 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 PHLPP1O60346 1717 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 SPHKAPQ2M3C7 1700 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms