RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NACC1Q96RE7 527 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 MTRQ99707 1265 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PLVAPQ9BX97 442 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PBX4Q9BYU1 374 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CCSER1Q9C0I3 900 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 BHMT2Q9H2M3 363 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 TMX1Q9H3N1 280 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 GOLPH3LQ9H4A5 285 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 ELAC1Q9H777 363 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 MINDY3Q9H8M7 445 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 SUGCTQ9HAC7 445 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CHST12Q9NRB3 414 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 DACT1Q9NYF0 836 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CXXC1Q9P0U4 656 aaPredicted RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 DBR1Q9UK59 544 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CDY2AQ9Y6F7 541 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 BRWD1Q9NSI6 2320 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 TTC3P53804 2025 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 MYO7AQ13402 2215 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 SYCE3A1L190 88 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ZBBXA8MT70 800 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SOX1O00570 391 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 GTPBP6O43824 516 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 TLL1O43897 1013 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 MGEA5O60502 916 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 USO1O60763 962 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 CUTAO60888 179 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ABCB7O75027 752 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 EYA4O95677 639 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 EDN1P05305 212 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 PTMAP06454 111 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 PLA2G4BP0C869 781 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 GHRP10912 638 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 CYP11B2P19099 503 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 FGFR4P22455 802 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 GLRA2P23416 452 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ABCD1P33897 745 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 RFC5P40937 340 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 UBA7P41226 1012 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 GPC3P51654 580 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 NLRP11P59045 1033 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 C1QBPQ07021 282 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 NCBP1Q09161 790 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 TBC1D8BQ0IIM8 1120 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 MCM6Q14566 821 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 MXD4Q14582 209 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 PTPROQ16827 1216 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 RESP18Q5W5W9 173 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 RINT1Q6NUQ1 792 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SASS6Q6UVJ0 657 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 C1orf186Q6ZWK4 172 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 MAEAQ7L5Y9 396 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 DEFB128Q7Z7B8 93 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 RTN4RL1Q86UN2 441 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 FAM228AQ86W67 206 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SYT2Q8N9I0 419 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 DBF4BQ8NFT6 615 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ERMNQ8TAM6 284 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SP7Q8TDD2 431 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 TCP11Q8WWU5 503 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 PRPF31Q8WWY3 499 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SLC7A3Q8WY07 619 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 RAD54LQ92698 747 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 LRCH3Q96II8 777 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 TGS1Q96RS0 853 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 OSMRQ99650 979 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ZBED2Q9BTP6 218 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 NFKBIZQ9BYH8 718 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 CELF4Q9BZC1 486 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SUCLA2Q9P2R7 463 aaPredicted RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 COG5Q9UP83 839 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 SSUH2Q9Y2M2 353 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 NOC2LQ9Y3T9 749 aaKnown RBP5.81□□□□□ -1.48
SHMT1-211ENST00000618902 TRPV2Q9Y5S1 764 aa5.81□□□□□ -1.48
SHMT1-211ENST00000618902 ADGRA3Q8IWK6 1321 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 PTPRSQ13332 1948 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 FAM237AA0A1B0GTK4 181 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ARHGEF35A5YM69 484 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 MYMKA6NI61 221 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 TTLL13PA6NNM8 815 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 SFI1A8K8P3 1242 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 C5orf67F2Z3F1 127 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ACTN4O43707 911 aaKnown RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 GADD45BO75293 160 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 DGAT1O75907 488 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 EOMESO95936 686 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 FOSL2P15408 326 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 EIF4BP23588 611 aaKnown RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CASP1P29466 404 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CD52P31358 61 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ME1P48163 572 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 ERVK-21P61565 698 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 CACNB1Q02641 598 aaPredicted RBP5.8□□□□□ -1.48
SHMT1-211ENST00000618902 UBE3AQ05086 875 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 RAD51AP2Q09MP3 1159 aa5.8□□□□□ -1.48
SHMT1-211ENST00000618902 LAMTOR4Q0VGL1 99 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms