RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 SCYL2Q6P3W7 929 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 TAOK1Q7L7X3 1001 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 SYN2Q92777 582 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 TMEM143Q96AN5 459 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 CABS1Q96KC9 395 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 EHD2Q9NZN4 543 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 PPP1R11O60927 126 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 DGAT1O75907 488 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 HSPA6P17066 643 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 RWDD2BP57060 319 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 NEDD9Q14511 834 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 TMEM270Q6UE05 265 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 CCDC89Q8N998 374 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 MGARPQ8TDB4 240 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 KCND1Q9NSA2 647 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 ATF2P15336 505 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 RPS12P25398 132 aaKnown RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 HADHQ16836 314 aaKnown RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 GPD1LQ8N335 351 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 PNKPQ96T60 521 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 FMO2Q99518 471 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.2□□□□□ -0.143e-7■□□□□ 11.2
PPP4R3B-206ENST00000616407 KIFC3Q9BVG8 833 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 SNX24Q9Y343 169 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 MIF4GDA9UHW6 222 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLITRK3O94933 977 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 SNRNP35Q16560 246 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 MAPK6Q16659 721 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 CAPN12Q6ZSI9 719 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 OTOP1Q7RTM1 612 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 TARSL2A2RTX5 802 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 ECEL1O95672 775 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 SNHG28P0DPA3 235 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 RFX1P22670 979 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 XKR3Q5GH77 459 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 CEP128Q6ZU80 1094 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 TRAPPC11Q7Z392 1133 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 PPP1R14CQ8TAE6 165 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 MOV10L1Q9BXT6 1211 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 VPS37BQ9H9H4 285 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 RBM12Q9NTZ6 932 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 ADAM22Q9P0K1 906 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 AGO2Q9UKV8 859 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 NOC2LQ9Y3T9 749 aaKnown RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 RNF8O76064 485 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 CDK17Q00537 523 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 TRIP13Q15645 432 aaPredicted RBP14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 IRF2BP1Q8IU81 584 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 ANKRD42Q8N9B4 389 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZNF507Q8TCN5 953 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 KCNMB3Q9NPA1 279 aa14.19□□□□□ -0.14
PPP4R3B-206ENST00000616407 KRT15P19012 456 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 CCT5P48643 541 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 ACOT2P49753 483 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 CUL1Q13616 776 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZRSR2Q15696 482 aaKnown RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 DNAJC24Q6P3W2 148 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZNF720Q7Z2F6 126 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC35G2Q8TBE7 412 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PSPC1Q8WXF1 523 aaKnown RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 APOL6Q9BWW8 343 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PHLPP1O60346 1717 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 LRP6O75581 1613 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 GRID2IPA4D2P6 1211 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 EZRP15311 586 aaKnown RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 VCAM1P19320 739 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZNF564Q8TBZ8 553 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SYTL5Q8TDW5 730 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 DNAJC19Q96DA6 116 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 C11orf70Q9BRQ4 267 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 TIPINQ9BVW5 301 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 NUP85Q9BW27 656 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 RBAKQ9NYW8 714 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 AMACRQ9UHK6 382 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 NAGPAQ9UK23 515 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 RNF225M0QZC1 329 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 HGSO14964 777 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 RSAD2Q8WXG1 361 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 ELP3Q9H9T3 547 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PPP1R9AQ9ULJ8 1098 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 STAT5BP51692 787 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 MNAT1P51948 309 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SNX16P57768 344 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PRKCEQ02156 737 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SESTD1Q86VW0 696 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PROCA1Q8NCQ7 364 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SHISA4Q96DD7 197 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 PACSIN1Q9BY11 444 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 GLIS2Q9BZE0 524 aaPredicted RBP14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC5A4Q9NY91 659 aa14.18□□□□□ -0.14
PPP4R3B-206ENST00000616407 CNGA1P29973 690 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms