RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	FXR2	P51116	673 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	SV2C	Q496J9	727 aa		10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	VSTM4	Q8IW00	320 aa		10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	ARHGAP24	Q8N264	748 aa		10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	DHX38	Q92620	1227 aa	Known RBP	10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	CNTNAP5	Q8WYK1	1306 aa		10.28	□□□□□ -0.76
NCAM1-222	ENST00000615285	LGALS16	A8MUM7	142 aa		10.27	□□□□□ -0.76
NCAM1-222	ENST00000615285	PGRMC1	O00264	195 aa	Known RBP	10.27	□□□□□ -0.76
NCAM1-222	ENST00000615285	HGS	O14964	777 aa	Predicted RBP	10.27	□□□□□ -0.76
NCAM1-222	ENST00000615285	CYP2C9	P11712	490 aa		10.27	□□□□□ -0.76
NCAM1-222	ENST00000615285	RBL2	Q08999	1139 aa		10.27	□□□□□ -0.76
NCAM1-222	ENST00000615285	PSMA2	P25787	234 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	EPHB1	P54762	984 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	NOTUM	Q6P988	496 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	GRAMD1C	Q8IYS0	662 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	CCNY	Q8ND76	341 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	MID2	Q9UJV3	735 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PITPNM2	Q9BZ72	1349 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	IGSF9B	Q9UPX0	1349 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	GNAS	Q5JWF2	1037 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	SCN4B	Q8IWT1	228 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	AFAP1L1	Q8TED9	768 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PCDHB7	Q9Y5E2	793 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	ECEL1	O95672	775 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PAM	P19021	973 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PRKCE	Q02156	737 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	KRT17	Q04695	432 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PPIL2	Q13356	520 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	SGO2	Q562F6	1265 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	KAZN	Q674X7	775 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	TRIM42	Q8IWZ5	723 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	C7orf25	Q9BPX7	421 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PLEKHA4	Q9H4M7	779 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	POLI	Q9UNA4	740 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	ANKRD26	Q9UPS8	1709 aa		10.27	□□□□□ -0.77
NCAM1-222	ENST00000615285	PARP4	Q9UKK3	1724 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	SFI1	A8K8P3	1242 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	EBAG9	O00559	213 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	TJP3	O95049	919 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	ZFX	P17010	805 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	PKP1	Q13835	747 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DARS2	Q6PI48	645 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	B4GALNT4	Q76KP1	1039 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	SRRM1	Q8IYB3	904 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	ANKRD13C	Q8N6S4	541 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	FBXL13	Q8NEE6	735 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DDX56	Q9NY93	547 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	ADAM22	Q9P0K1	906 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DPP7	Q9UHL4	492 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	LSM7	Q9UK45	103 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	TADA2A	O75478	443 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	CYBB	P04839	570 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	RWDD2B	P57060	319 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	RAD51	Q06609	339 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	KRT31	Q15323	416 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	KIAA1755	Q5JYT7	1200 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	APPL2	Q8NEU8	664 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285		A8MXQ7	604 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	RGS16	O15492	202 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	PPFIA4	O75335	1185 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	VIL1	P09327	827 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	THOC5	Q13769	683 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	TMEM132D	Q14C87	1099 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	STOX1	Q6ZVD7	989 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	MRRF	Q96E11	262 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	INTS2	Q9H0H0	1204 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	MYO5B	Q9ULV0	1848 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	CP	P00450	1065 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	TGFB3	P10600	412 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	SDC4	P31431	198 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	ETF1	P62495	437 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DRP2	Q13474	957 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	MAD2L2	Q9UI95	211 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	CCDC160	A6NGH7	325 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285		H7C4K7	107 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	MSC	O60682	206 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DSG3	P32926	999 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	VTA1	Q9NP79	307 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	WDR35	Q9P2L0	1181 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	IP6K2	Q9UHH9	426 aa		10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	DDX41	Q9UJV9	622 aa	Known RBP	10.26	□□□□□ -0.77
NCAM1-222	ENST00000615285	TROVE2	P10155	538 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	PCSK1	P29120	753 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	MAPRE1	Q15691	268 aa	Known RBP	10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	DACT2	Q5SW24	774 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	PCNX4	Q63HM2	1172 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	CCDC62	Q6P9F0	684 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	PCGF5	Q86SE9	256 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	COLEC11	Q9BWP8	271 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	PCDHB8	Q9UN66	801 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	P4HA2	O15460	535 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	KRT7	P08729	469 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	RPA1	P27694	616 aa		10.25	□□□□□ -0.77
NCAM1-222	ENST00000615285	GPC5	P78333	572 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms