RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KIFAP3Q92845 792 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 ZNF302Q9NR11 478 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 HSPBP1Q9NZL4 362 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 GSTTP1A0A1W2PQM5 241 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ANKRD63C9JTQ0 380 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 TADA3O75528 432 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 CYP2C8P10632 490 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 DLG4P78352 724 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 PPP2R5AQ15172 486 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ENOX2Q16206 610 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 MNS1Q8NEH6 495 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 PCYT2Q99447 389 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 NTPCRQ9BSD7 190 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 KMT5AQ9NQR1 393 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 PNMA3Q9UL41 463 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 IGKV6D-21A0A0A0MT36 114 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ALDH1A1P00352 501 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ADSSP30520 456 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 SMTNP53814 917 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 KIF5AQ12840 1032 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ASIC2Q16515 512 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 IRF2BP2Q7Z5L9 587 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 MAP4K3Q8IVH8 894 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 SLC17A8Q8NDX2 589 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 SPIRE2Q8WWL2 714 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 ATP6V0A4Q9HBG4 840 aa18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 CGNQ9P2M7 1197 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-216ENST00000598201 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 DNAJC25-GNG10A0A024R161 153 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 MACROD2A1Z1Q3 448 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 RBAK-RBAKDNI3L0D1 243 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 ARIH2O95376 493 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 TAF1CQ15572 869 aaPredicted RBP18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 LY6KQ17RY6 165 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 IQCEQ6IPM2 695 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 XXYLT1Q8NBI6 393 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 SPAG5Q96R06 1193 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 CDC23Q9UJX2 597 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 FBXL5Q9UKA1 691 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 THSD7BQ9C0I4 1608 aa18.58■□□□□ 0.57
SHKBP1-216ENST00000598201 MYH9P35579 1960 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 OATP04181 439 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 MAGEA1P43355 309 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 JAM2P57087 298 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 AMPD2Q01433 879 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 MAP2K1Q02750 393 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 C1orf220Q5T0J3 134 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 WDR78Q5VTH9 848 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 MMP19Q99542 508 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 POLR3FQ9H1D9 316 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 C17orf75Q9HAS0 396 aa18.58■□□□□ 0.56
SHKBP1-216ENST00000598201 GOLGA8IPA6NC78 632 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 GOLGA8JA6NMD2 632 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 ENC1O14682 589 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 ERVK-9P63128 1117 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 EMC2Q15006 297 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 SLC39A4Q6P5W5 647 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 PARK7Q99497 189 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 TSGA10Q9BZW7 698 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 PORCNQ9H237 461 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 MLXIPQ9HAP2 919 aa18.57■□□□□ 0.56
SHKBP1-216ENST00000598201 GGPS1O95749 300 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 ADRB2P07550 413 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 PNMA6AP0CW24 399 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 KRT13P13646 458 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 CNGA1P29973 690 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 VAMP7P51809 220 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 RTP1P59025 263 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 SNRPFP62306 86 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 MYL7Q01449 175 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 PPP3CAQ08209 521 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 NEDD9Q14511 834 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 KCTD2Q14681 263 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 INTS8Q75QN2 995 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 TAS1R3Q7RTX0 852 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 RNF186Q9NXI6 227 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 A0A087X0T9 212 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 EFCAB8A8MWE9 144 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 CA12O43570 354 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 TRPA1O75762 1119 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 ATP1A1P05023 1023 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 FAM228BP0C875 321 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 TGFB3P10600 412 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 COPB2P35606 906 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 PTK2Q05397 1052 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 SECISBP2LQ93073 1101 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 TMEM143Q96AN5 459 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 INTS2Q9H0H0 1204 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 EFCC1Q9HA90 598 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 ZFYVE28Q9HCC9 887 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms