RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 RNF169Q8NCN4 708 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PRPF31Q8WWY3 499 aaKnown RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 PGBD4Q96DM1 585 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 NLRP4Q96MN2 994 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 FDXACB1Q9BRP7 624 aaPredicted RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 IGFLR1Q9H665 355 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 GJB4Q9NTQ9 266 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 ANKEF1Q9NU02 776 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 RNF19AQ9NV58 838 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PCDHA12Q9UN75 941 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 LIMCH1Q9UPQ0 1083 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PIN4Q9Y237 131 aaKnown RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PTPRSQ13332 1948 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 TRIP12Q14669 1992 aaPredicted RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 TMEM150BA6NC51 233 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 DCXO43602 365 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 NEMFO60524 1076 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 XRCC6P12956 609 aaKnown RBP eCLIP8.48□□□□□ -1.05
NPC1-208ENST00000590301 HOXB8P17481 243 aaPredicted RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 ATF7P17544 494 aaPredicted RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 ALDH7A1P49419 539 aaKnown RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 NPEPPSP55786 919 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 NCBP1Q09161 790 aaKnown RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 LAMTOR4Q0VGL1 99 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 TFDP1Q14186 410 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 DUSP6Q16828 381 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 XKR9Q5GH70 373 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CLLU1OSQ5K130 101 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 NCAPH2Q6IBW4 605 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 TMEM184AQ6ZMB5 413 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 LRRC55Q6ZSA7 311 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 HELQQ8TDG4 1101 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CCDC51Q96ER9 411 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 ZNF668Q96K58 619 aaPredicted RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 ZSCAN31Q96LW9 406 aaPredicted RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 CCDC43Q96MW1 224 aaKnown RBP8.48□□□□□ -1.05
NPC1-208ENST00000590301 HSD17B14Q9BPX1 270 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 TCF25Q9BQ70 676 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CD320Q9NPF0 282 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 UBN1Q9NPG3 1134 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 ENTPD7Q9NQZ7 604 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 AGPAT5Q9NUQ2 364 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CLEC1BQ9P126 229 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 CNTNAP2Q9UHC6 1331 aa8.48□□□□□ -1.05
NPC1-208ENST00000590301 SIP14410 1827 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 PRR33A8MZF0 331 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 LINC01565O15544 149 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 JAK2O60674 1132 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 DGAT1O75907 488 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 SLITRK3O94933 977 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 CSPG5O95196 566 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 LARGE1O95461 756 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 FGFR4P22455 802 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 AXLP30530 894 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 GTF2F1P35269 517 aaKnown RBP eCLIP8.47□□□□□ -1.05
NPC1-208ENST00000590301 ERVFC1P60507 584 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 DLX2Q07687 328 aaPredicted RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 GIT2Q14161 759 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 EMC2Q15006 297 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 NOMO2Q5JPE7 1267 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 EARS2Q5JPH6 523 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 TMC7Q7Z402 723 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 MRPL10Q7Z7H8 261 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 ADGRD2Q7Z7M1 963 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 RBM23Q86U06 439 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 TPH2Q8IWU9 490 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 URGCPQ8TCY9 931 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 TMEM143Q96AN5 459 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 TMEM169Q96HH4 297 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 DYDC2Q96IM9 177 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 MTMR9Q96QG7 549 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 MTRQ99707 1265 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 EIF2AK1Q9BQI3 630 aaKnown RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 SH2D3AQ9BRG2 576 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 LRFN3Q9BTN0 628 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 NFKBIZQ9BYH8 718 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 EPHX3Q9H6B9 360 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 TTC12Q9H892 705 aaPredicted RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 IFT122Q9HBG6 1241 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 FAM105AQ9NUU6 356 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 RGL1Q9NZL6 768 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 KANSL3Q9P2N6 904 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 WRAP73Q9P2S5 460 aaPredicted RBP8.47□□□□□ -1.05
NPC1-208ENST00000590301 HCN4Q9Y3Q4 1203 aa8.47□□□□□ -1.05
NPC1-208ENST00000590301 TTC3P53804 2025 aa8.46□□□□□ -1.05
NPC1-208ENST00000590301 FAM205CA6NFA0 338 aa8.46□□□□□ -1.06
NPC1-208ENST00000590301 CSDE1O75534 798 aaKnown RBP8.46□□□□□ -1.06
NPC1-208ENST00000590301 ERLIN2O94905 339 aa8.46□□□□□ -1.06
NPC1-208ENST00000590301 GLP2RO95838 553 aa8.46□□□□□ -1.06
NPC1-208ENST00000590301 SRGAP2CP0DJJ0 459 aa8.46□□□□□ -1.06
NPC1-208ENST00000590301 TRAPPC10P48553 1259 aa8.46□□□□□ -1.06
NPC1-208ENST00000590301 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms