RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 EFCAB12Q6NXP0 572 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 KATNAL1Q9BW62 490 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 TMEM134Q9H6X4 195 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.33■□□□□ 0.84
PRKCA-203ENST00000578063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.33■□□□□ 0.842e-6■■□□□ 13.6
PRKCA-203ENST00000578063 KPNA6O60684 536 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 HMGCRP04035 888 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 KLRC1P26715 233 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 CYP2J2P51589 502 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 EFNA5P52803 228 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 GJA9P57773 515 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 CACNB2Q08289 660 aaPredicted RBP20.32■□□□□ 0.84
PRKCA-203ENST00000578063 LAMTOR4Q0VGL1 99 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 TRIM14Q14142 442 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 CDCA2Q69YH5 1023 aaPredicted RBP20.32■□□□□ 0.84
PRKCA-203ENST00000578063 ARMCX5Q6P1M9 558 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 FAM186BQ8IYM0 893 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 METTL13Q8N6R0 699 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 LINC01465Q8N7H1 131 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 KAT2BQ92831 832 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
PRKCA-203ENST00000578063 C2orf40Q9H1Z8 148 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 SPC25Q9HBM1 224 aa20.32■□□□□ 0.84
PRKCA-203ENST00000578063 HNRNPDLO14979 420 aaKnown RBP20.31■□□□□ 0.84
PRKCA-203ENST00000578063 EXOC3O60645 756 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 RARBP10826 455 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
PRKCA-203ENST00000578063 SFPQP23246 707 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■□□ 15.5
PRKCA-203ENST00000578063 TMOD1P28289 359 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 CNGA1P29973 690 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 CASP4P49662 377 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 MFSD10Q14728 455 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 KIAA0753Q2KHM9 967 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 MTHFD1LQ6UB35 978 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 TAS1R3Q7RTX0 852 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 ZBTB8OSQ8IWT0 167 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 RAET1EQ8TD07 263 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 ERGIC2Q96RQ1 377 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
PRKCA-203ENST00000578063 NRCAMQ92823 1304 aa20.31■□□□□ 0.84
PRKCA-203ENST00000578063 K7ERI5 159 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 PIGRP01833 764 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 MYL3P08590 195 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 ELNP15502 786 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 CLCN3P51790 818 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 PRMT2P55345 433 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 NKX3-2P78367 333 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 TRIM32Q13049 653 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 PPFIBP1Q86W92 1011 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 RHPN2Q8IUC4 686 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 XXYLT1Q8NBI6 393 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 PXYLP1Q8TE99 480 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 BICD1Q96G01 975 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 HAS3O00219 553 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 MAPK13O15264 365 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 TPM1P09493 284 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 C6orf222P0C671 652 aaPredicted RBP20.3■□□□□ 0.84
PRKCA-203ENST00000578063 PSEN2P49810 448 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 BEX3Q00994 111 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 ZSCAN30Q86W11 494 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 LRRC8AQ8IWT6 810 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 RNF149Q8NC42 400 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 CBWD1Q9BRT8 395 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 BEGAINQ9BUH8 593 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 ZKSCAN5Q9Y2L8 839 aa20.3■□□□□ 0.84
PRKCA-203ENST00000578063 TISP43B9A030 160 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 SMIM10L2AP0DMW4 78 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 SMIM10L2BP0DMW5 78 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 GARTP22102 1010 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 LIG4P49917 911 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 POU5F1BQ06416 359 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 MAP3K21Q5TCX8 1036 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 CACTINQ8WUQ7 758 aaKnown RBP20.29■□□□□ 0.84
PRKCA-203ENST00000578063 ZNF296Q8WUU4 475 aaPredicted RBP20.29■□□□□ 0.84
PRKCA-203ENST00000578063 IQCDQ96DY2 449 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 BORCS6Q96GS4 357 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 NFKBIZQ9BYH8 718 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 SIP14410 1827 aa20.29■□□□□ 0.84
PRKCA-203ENST00000578063 ANKRD63C9JTQ0 380 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 ZEB2O60315 1214 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 SRGAP2CP0DJJ0 459 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 PURAQ00577 322 aaKnown RBP20.28■□□□□ 0.84
PRKCA-203ENST00000578063 MAP2K1Q02750 393 aaPredicted RBP20.28■□□□□ 0.84
PRKCA-203ENST00000578063 SYCP1Q15431 976 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 MARCH8Q5T0T0 291 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
PRKCA-203ENST00000578063 ZNF830Q96NB3 372 aaPredicted RBP20.28■□□□□ 0.84
PRKCA-203ENST00000578063 KIAA0391O15091 583 aaKnown RBP20.27■□□□□ 0.84
PRKCA-203ENST00000578063 NRDCO43847 1150 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 AFPP02771 609 aaKnown RBP20.27■□□□□ 0.84
PRKCA-203ENST00000578063 HSPA6P17066 643 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 ADSSP30520 456 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
PRKCA-203ENST00000578063 HSP90AA2PQ14568 343 aaPredicted RBP20.27■□□□□ 0.84
PRKCA-203ENST00000578063 ARID5BQ14865 1188 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 SLC39A4Q6P5W5 647 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 INTS8Q75QN2 995 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms