RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PLXNA4Q9HCM2 1894 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 TTC3P53804 2025 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 PRUNE2Q8WUY3 3088 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 EPOPA6NHQ4 379 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 INO80B-WBP1J3KQ70 363 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 ENPP3O14638 875 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 POLR2DO15514 142 aaKnown RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 TSPAN1O60635 241 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 CA3P07451 260 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 PFKMP08237 780 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 ATF7P17544 494 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 STAT6P42226 847 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 NDUFA8P51970 172 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 PEX3P56589 373 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 GIT2Q14161 759 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 PAN2Q504Q3 1202 aaKnown RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 UBXN11Q5T124 520 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 RRAGBQ5VZM2 374 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 HERC6Q8IVU3 1022 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 RPUSD2Q8IZ73 545 aaKnown RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 NME8Q8N427 588 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 ADAM2Q99965 735 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 EIF2AQ9BY44 585 aaKnown RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 INO80BQ9C086 356 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 SCAND2PQ9GZW5 306 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 CCDC113Q9H0I3 377 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 BLZF1Q9H2G9 400 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 SERTAD1Q9UHV2 236 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 SLC4A7Q9Y6M7 1214 aa8.75□□□□□ -1.01
CCDC40-215ENST00000576033 MORC2Q9Y6X9 1032 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-215ENST00000576033 TISP43B9A030 160 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 SLC16A4O15374 487 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 ACTN4O43707 911 aaKnown RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 BAIAP3O94812 1187 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 CSPG5O95196 566 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 XRCC6P12956 609 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 MUTP22033 750 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 DNAJB2P25686 324 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 NMT1P30419 496 aaKnown RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 HOXA11P31270 313 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 NPTX2P47972 431 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 KCNJ6P48051 423 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 DNM2P50570 870 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 AFF1P51825 1210 aaKnown RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 CASP5P51878 434 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 PTENP60484 403 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 IKBKEQ14164 716 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 EEF1DP3Q658K8 133 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 CDCA2Q69YH5 1023 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 CATSPER4Q7RTX7 472 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 ZNF410Q86VK4 478 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 SFR1Q86XK3 245 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 FSIP1Q8NA03 581 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 MCPH1Q8NEM0 835 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 TCP11Q8WWU5 503 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 ERCC4Q92889 916 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 DNAJC19Q96DA6 116 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 FIZ1Q96SL8 496 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 GCOM2Q9BZD3 368 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-215ENST00000576033 NT5C3AQ9H0P0 336 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 ZHX3Q9H4I2 956 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 AGPAT5Q9NUQ2 364 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 TBC1D7Q9P0N9 293 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 CFAP45Q9UL16 551 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 MTUS1Q9ULD2 1270 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 HES2Q9Y543 173 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 RALGAPA2Q2PPJ7 1873 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 UNC80Q8N2C7 3258 aa8.74□□□□□ -1.01
CCDC40-215ENST00000576033 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 ANK1P16157 1881 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 PDCD11Q14690 1871 aaKnown RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 DENND3A2RUS2 1198 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CCDC169A6NNP5 214 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 RFXAPO00287 272 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 B4GALT3O60512 393 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 MYBP10242 640 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 ACTN1P12814 892 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 ARF4P18085 180 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 GUCY2CP25092 1073 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 TXLNAP40222 546 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 PBX3P40426 434 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 AFMP43652 599 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 PHKA2P46019 1235 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CUL4BQ13620 913 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 ZSCAN23Q3MJ62 389 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 ZC2HC1CQ53FD0 456 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CLLU1OSQ5K130 101 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 NT5DC1Q5TFE4 455 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 GAS2L3Q86XJ1 694 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CRIPAKQ8N1N5 446 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CEP120Q8N960 986 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 DDX12PQ92771 950 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 HAPLN2Q9GZV7 340 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms