RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 MYO10Q9HD67 2058 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 HIDE1A8MVS5 230 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 ZNF623O75123 536 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 MED24O75448 989 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 OFD1O75665 1012 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 LAG3P18627 525 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 MCM7P33993 719 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 RARRES1P49788 294 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 CDC42EP1Q00587 391 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 UBE3AQ05086 875 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 ZNF174Q15697 407 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 AGMOQ6ZNB7 445 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 GJD3Q8N144 294 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 PSPC1Q8WXF1 523 aaKnown RBP16.42■□□□□ 0.22
USB1-210ENST00000565151 MRPS27Q92552 414 aaKnown RBP16.42■□□□□ 0.22
USB1-210ENST00000565151 C8orf76Q96K31 380 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
USB1-210ENST00000565151 BARX2Q9UMQ3 279 aaPredicted RBP16.42■□□□□ 0.22
USB1-210ENST00000565151 C2orf16Q68DN1 1984 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 PI4K2BG5E9Z4 385 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 NCK2O43639 380 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
USB1-210ENST00000565151 SFPQP23246 707 aaKnown RBP eCLIP16.41■□□□□ 0.22
USB1-210ENST00000565151 ARL2P36404 184 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 TOB1P50616 345 aaPredicted RBP16.41■□□□□ 0.22
USB1-210ENST00000565151 BCAR1P56945 870 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 TRIM29Q14134 588 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 SMAD2Q15796 467 aaKnown RBP16.41■□□□□ 0.22
USB1-210ENST00000565151 ECM1Q16610 540 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 AMHR2Q16671 573 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 DUSP6Q16828 381 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 PLPP4Q5VZY2 271 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 TWF2Q6IBS0 349 aaKnown RBP16.41■□□□□ 0.22
USB1-210ENST00000565151 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 LRRC43Q8N309 656 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
USB1-210ENST00000565151 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 NRDE2Q9H7Z3 1164 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 AAASQ9NRG9 546 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 ANKEF1Q9NU02 776 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 DNAJB4Q9UDY4 337 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 PPME1Q9Y570 386 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 PCDHB2Q9Y5E7 798 aa16.41■□□□□ 0.22
USB1-210ENST00000565151 MYH11P35749 1972 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 FAM86C2PA6NEL3 165 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 HOXA2O43364 376 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 EYA4O95677 639 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 COL9A1P20849 921 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 GLRA2P23416 452 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 PTENP60484 403 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 CAPSQ13938 189 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 PUS10Q3MIT2 529 aaKnown RBP16.4■□□□□ 0.22
USB1-210ENST00000565151 OTUD6AQ7L8S5 288 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
USB1-210ENST00000565151 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 SMG8Q8ND04 991 aaKnown RBP16.4■□□□□ 0.22
USB1-210ENST00000565151 FEZF2Q8TBJ5 459 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 ZNF558Q96NG5 402 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 MTRQ99707 1265 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 INO80BQ9C086 356 aaPredicted RBP16.4■□□□□ 0.22
USB1-210ENST00000565151 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
USB1-210ENST00000565151 TLE6Q9H808 572 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 GPRC5CQ9NQ84 441 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 TBC1D13Q9NVG8 400 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 CD207Q9UJ71 328 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 LZTS1Q9Y250 596 aa16.4■□□□□ 0.22
USB1-210ENST00000565151 TSPAN1O60635 241 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 DDHD2O94830 711 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 TECP42680 631 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 NDUFV1P49821 464 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 COASYQ13057 564 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 SMAD4Q13485 552 aaKnown RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 SMRP1Q8NCR6 262 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 ZSCAN31Q96LW9 406 aaPredicted RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 TCF25Q9BQ70 676 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 EIF2AQ9BY44 585 aaKnown RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 SPG21Q9NZD8 308 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 CDH22Q9UJ99 828 aa16.39■□□□□ 0.21
USB1-210ENST00000565151 MTCL1Q9Y4B5 1905 aaKnown RBP16.39■□□□□ 0.21
USB1-210ENST00000565151 TECTAO75443 2155 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 DENND4AQ7Z401 1863 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 GAS2O43903 313 aaKnown RBP16.38■□□□□ 0.21
USB1-210ENST00000565151 GALTP07902 379 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 MBTD1Q05BQ5 628 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 IL17AQ16552 155 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
USB1-210ENST00000565151 NOMO2Q5JPE7 1267 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms