RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 P4HBP07237 508 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SPARCL1Q14515 664 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 TAGAPQ8N103 731 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 RAD54LQ92698 747 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 THOC1Q96FV9 657 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CENPKQ9BS16 269 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CCDC151A5D8V7 595 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 DFFAO00273 331 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 ZNF197O14709 1029 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 MCAMP43121 646 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 ANKS3Q6ZW76 656 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 EPAS1Q99814 870 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 ERBB3P21860 1342 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 IQCA1LA6NCM1 817 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 ASB14A6NK59 587 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 PRDX5P30044 214 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 GNA15P30679 374 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 TADA2BQ86TJ2 420 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 OR6P1Q8NGX9 317 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SRPK1Q96SB4 655 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 POLD4Q9HCU8 107 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 TJP2Q9UDY2 1190 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 PZPP20742 1482 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 KITP10721 976 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 ARL4DP49703 201 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 WASHC5Q12768 1159 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 HLFQ16534 295 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 NUGGCQ68CJ6 796 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SH3TC2Q8TF17 1288 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 LRRC37BQ96QE4 947 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 PANX2Q96RD6 677 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 STRBPQ96SI9 672 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CEP72Q9P209 647 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SCOCQ9UIL1 159 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 CDV3Q9UKY7 258 aaKnown RBP11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SNX24Q9Y343 169 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 SLC4A7Q9Y6M7 1214 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 PLEKHG1Q9ULL1 1385 aa11.97□□□□□ -0.49
RPAP1-204ENST00000562303 MIF4GDA9UHW6 222 aaKnown RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 NR1D1P20393 614 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 COPB2P35606 906 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 ALS2CLQ60I27 953 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 MXD3Q9BW11 206 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 NFU1Q9UMS0 254 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 SYNGAP1Q96PV0 1343 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 SYCE1LA8MT33 242 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 PALMO75781 387 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 SKIP12755 728 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 HLA-DPA1P20036 260 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 GRIK1P39086 918 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 STAT3P40763 770 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 VAMP7P51809 220 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 DCUN1D1Q96GG9 259 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 DHX35Q9H5Z1 703 aaKnown RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 NARFQ9UHQ1 456 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 UTYO14607 1347 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 ZSCAN9O15535 394 aaPredicted RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 HDLBPQ00341 1268 aaKnown RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 FLOT2Q14254 428 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 KLHL38Q2WGJ6 581 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 RRM2BQ7LG56 351 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 TTC39CQ8N584 583 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 OR6J1Q8NGC5 347 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 RAPGEF5Q92565 580 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 MTBPQ96DY7 904 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 NAF1Q96HR8 494 aaKnown RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 ZNF560Q96MR9 790 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 PITPNM3Q9BZ71 974 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.49
RPAP1-204ENST00000562303 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
RPAP1-204ENST00000562303 CTIFO43310 598 aaKnown RBP11.96□□□□□ -0.5
RPAP1-204ENST00000562303 SPAG7O75391 227 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 PSMC5P62195 406 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 RNF135Q8IUD6 432 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 TRIM62Q9BVG3 475 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 AFF2P51816 1311 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.5
RPAP1-204ENST00000562303 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 CCDC188H7C350 402 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 ALDH1A1P00352 501 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 LCP1P13796 627 aa11.96□□□□□ -0.5
RPAP1-204ENST00000562303 ST8SIA6P61647 398 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms