RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 INTS2Q9H0H0 1204 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 AMACRQ9UHK6 382 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 MRPL11Q9Y3B7 192 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 SMCHD1A6NHR9 2005 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 UBE4BO95155 1302 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 ITGA4P13612 1032 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 NR1D1P20393 614 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 NPEPPSP55786 919 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 IFT88Q13099 833 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 PRPF4BQ13523 1007 aaKnown RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 MAEAQ7L5Y9 396 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 CD302Q8IX05 232 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 CCDC13Q8IYE1 715 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 SLC35G2Q8TBE7 412 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 RFFLQ8WZ73 363 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 LRRC45Q96CN5 670 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 SLC40A1Q9NP59 571 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 SYNPO2Q9UMS6 1093 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 STXBP5LQ9Y2K9 1186 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 LRRN2O75325 713 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 CHRNA5P30532 468 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 CDR1P51861 262 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 ZNF131P52739 623 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 GUCY1A3Q02108 690 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 CCDC26Q8TAB7 109 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 HSD17B3P37058 310 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 NAA35Q5VZE5 725 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 KDM7AQ6ZMT4 941 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 RASGEF1CQ8N431 466 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
NEIL1-202ENST00000561643 SLC30A5Q8TAD4 765 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
NEIL1-202ENST00000561643 K7ENM7 598 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 HIP1RO75146 1068 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 FGGP02679 453 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 VIL1P09327 827 aaKnown RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 TMEM253P0C7T8 217 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 KRT13P13646 458 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 ECHS1P30084 290 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 SEC24CP53992 1094 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 STYK1Q6J9G0 422 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 HES6Q96HZ4 224 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 HMGB1P1B2RPK0 211 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 TTI1O43156 1089 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 DAPK3O43293 454 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 AP1G2O75843 785 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 MYZAPP0CAP1 466 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 MUTP22033 750 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 HPDP32754 393 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 CTNNA1P35221 906 aaKnown RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 SMTNP53814 917 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 BFSP1Q12934 665 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 WLSQ5T9L3 541 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 UBLCP1Q8WVY7 318 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 DMAC2Q9NW81 257 aa11.86□□□□□ -0.51
NEIL1-202ENST00000561643 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.86□□□□□ -0.51
NEIL1-202ENST00000561643 EME2A4GXA9 379 aaPredicted RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 RASSF9O75901 435 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 OR2W6PQ8NHA6 318 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 CELF4Q9BZC1 486 aaKnown RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 PICK1Q9NRD5 415 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 PPP1R9AQ9ULJ8 1098 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 NCANO14594 1321 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 SNX1Q13596 522 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 CRYMQ14894 314 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 LDHDQ86WU2 507 aa11.85□□□□□ -0.51
NEIL1-202ENST00000561643 ZNF473Q8WTR7 871 aaKnown RBP11.85□□□□□ -0.51
NEIL1-202ENST00000561643 CCDC114Q96M63 670 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms