RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 SPG21Q9NZD8 308 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
TPM1-227ENST00000560970 NR2E1Q9Y466 385 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 HCFC2Q9Y5Z7 792 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 GJB2P29033 226 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 TRIM29Q14134 588 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 MOXD1Q6UVY6 613 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 ZBTB33Q86T24 672 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
TPM1-227ENST00000560970 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 RDM1Q8NG50 284 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 HELQQ8TDG4 1101 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 SLC5A5Q92911 643 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 NECTIN4Q96NY8 510 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 RIT2Q99578 217 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 S1PR5Q9H228 398 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 UNC45AQ9H3U1 944 aa12.03□□□□□ -0.48
TPM1-227ENST00000560970 DDX25Q9UHL0 483 aaKnown RBP12.03□□□□□ -0.48
TPM1-227ENST00000560970 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 CARNS1A5YM72 827 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
TPM1-227ENST00000560970 PSMD10O75832 226 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPM1-227ENST00000560970 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
TPM1-227ENST00000560970 VCPP55072 806 aaKnown RBP12.02□□□□□ -0.49
TPM1-227ENST00000560970 TCF15Q12870 199 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 MTMR3Q13615 1198 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 CUL4AQ13619 759 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 IER5LQ5T953 404 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
TPM1-227ENST00000560970 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 KCNMB3Q9NPA1 279 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
TPM1-227ENST00000560970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
TPM1-227ENST00000560970 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 ZC3H11AO75152 810 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-227ENST00000560970 EOMESO95936 686 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 FGFR4P22455 802 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 CA8P35219 290 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 ITIH3Q06033 890 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 DRP2Q13474 957 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
TPM1-227ENST00000560970 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
TPM1-227ENST00000560970 MTERF2Q49AM1 385 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 CES5AQ6NT32 575 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 B3GNT9Q6UX72 402 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 ZNF410Q86VK4 478 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 HAS1Q92839 578 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 TMEM169Q96HH4 297 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 GCOM2Q9BZD3 368 aaPredicted RBP12.01□□□□□ -0.49
TPM1-227ENST00000560970 ZBP1Q9H171 429 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 POMKQ9H5K3 350 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 DZANK1Q9NVP4 752 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
TPM1-227ENST00000560970 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 MIA3Q5JRA6 1907 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 MYH15Q9Y2K3 1946 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
TPM1-227ENST00000560970 CLASP2O75122 1294 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 GCFC2P16383 781 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 MTHFRP42898 656 aa12□□□□□ -0.49
TPM1-227ENST00000560970 PHKA2P46019 1235 aa12□□□□□ -0.49
TPM1-227ENST00000560970 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 RAB27AP51159 221 aa12□□□□□ -0.49
TPM1-227ENST00000560970 BCAR1P56945 870 aa12□□□□□ -0.49
TPM1-227ENST00000560970 CDC42EP1Q00587 391 aa12□□□□□ -0.49
TPM1-227ENST00000560970 SAFBQ15424 915 aaKnown RBP eCLIP12□□□□□ -0.49
TPM1-227ENST00000560970 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 KIAA1841Q6NSI8 718 aa12□□□□□ -0.49
TPM1-227ENST00000560970 MIER3Q7Z3K6 550 aa12□□□□□ -0.49
TPM1-227ENST00000560970 MRPL43Q8N983 215 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 TDRD5Q8NAT2 981 aaKnown RBP12□□□□□ -0.49
TPM1-227ENST00000560970 RIPOR3Q96MK2 946 aa12□□□□□ -0.49
TPM1-227ENST00000560970 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
TPM1-227ENST00000560970 ADAM7Q9H2U9 754 aa12□□□□□ -0.49
TPM1-227ENST00000560970 FOXP1Q9H334 677 aaPredicted RBP12□□□□□ -0.49
TPM1-227ENST00000560970 CHST12Q9NRB3 414 aa12□□□□□ -0.49
TPM1-227ENST00000560970 CDH22Q9UJ99 828 aa12□□□□□ -0.49
TPM1-227ENST00000560970 VAV3Q9UKW4 847 aa12□□□□□ -0.49
TPM1-227ENST00000560970 SORCS3Q9UPU3 1222 aa12□□□□□ -0.49
TPM1-227ENST00000560970 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
TPM1-227ENST00000560970 VPS13AQ96RL7 3174 aa12□□□□□ -0.49
TPM1-227ENST00000560970 TMEM150BA6NC51 233 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 C2CD4DB7Z1M9 353 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 K7ELQ4 463 aaPredicted RBP11.99□□□□□ -0.49
TPM1-227ENST00000560970 EML1O00423 815 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 SKIP12755 728 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 DNM2P50570 870 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 POLGP54098 1239 aaPredicted RBP11.99□□□□□ -0.49
TPM1-227ENST00000560970 GIT2Q14161 759 aa11.99□□□□□ -0.49
TPM1-227ENST00000560970 NBR1Q14596 966 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms