RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 BSNDQ8WZ55 320 aa12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 ERO1AQ96HE7 468 aa12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 NFKBIZQ9BYH8 718 aa12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 KIAA1586Q9HCI6 787 aa12.96□□□□□ -0.33
AC087878.1-201ENST00000560709 MYH11P35749 1972 aa12.96□□□□□ -0.34
AC087878.1-201ENST00000560709 CASP8AP2Q9UKL3 1982 aa12.96□□□□□ -0.34
AC087878.1-201ENST00000560709 NRCAMQ92823 1304 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 GTPBP10A4D1E9 387 aaKnown RBP12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 ZBTB42B2RXF5 422 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 ADCY3O60266 1144 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 STX10O60499 249 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 EXOC3O60645 756 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 N4BP1O75113 896 aaKnown RBP12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 AKAP3O75969 853 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 C22orf31O95567 290 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 KRT13P13646 458 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 CTGFP29279 349 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 NKX3-2P78367 333 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 KCNA1Q09470 495 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 CCL14Q16627 93 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 CEP135Q66GS9 1140 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 POLD4Q9HCU8 107 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 RNF186Q9NXI6 227 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
AC087878.1-201ENST00000560709 MGAMO43451 1857 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 A0A1W2PQJ5 194 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 K7ERI5 159 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 CLIC2O15247 247 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 P4HA2O15460 535 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 SEPT4O43236 478 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 TBC1D8O95759 1140 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 TUBB4AP04350 444 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 INSRRP14616 1297 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 CNGA1P29973 690 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 LIG4P49917 911 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 MCCD1P59942 119 aaPredicted RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 PRKCZQ05513 592 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 TRIB2Q92519 343 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 BICD1Q96G01 975 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 UPF3AQ9H1J1 476 aaKnown RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 SUCLA2Q9P2R7 463 aaPredicted RBP12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
AC087878.1-201ENST00000560709 GPR25O00155 361 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 MFAP3LO75121 409 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 HMGCRP04035 888 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 RARBP10826 455 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 GNAT1P11488 350 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 PHKA2P46019 1235 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 VEGFBP49765 207 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 GJA9P57773 515 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 CETN1Q12798 172 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 CAPSQ13938 189 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 PCBP1Q15365 356 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 GRIK4Q16099 956 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 MAPK6Q16659 721 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 MTHFD1LQ6UB35 978 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 LINC01465Q8N7H1 131 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 EEF2KMTQ96G04 330 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 NUCKS1Q9H1E3 243 aaKnown RBP12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 KCNF1Q9H3M0 494 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 RNPEPQ9H4A4 650 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 SUGCTQ9HAC7 445 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 HSPBP1Q9NZL4 362 aa12.93□□□□□ -0.34
AC087878.1-201ENST00000560709 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
AC087878.1-201ENST00000560709 HAS3O00219 553 aa12.92□□□□□ -0.34
AC087878.1-201ENST00000560709 PMM2O15305 246 aa12.92□□□□□ -0.34
AC087878.1-201ENST00000560709 ARHGAP6O43182 974 aa12.92□□□□□ -0.34
AC087878.1-201ENST00000560709 MSCO60682 206 aa12.92□□□□□ -0.34
AC087878.1-201ENST00000560709 TRPA1O75762 1119 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms