RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
IDH3A-219ENST00000560414 TBC1D32Q96NH3 1257 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 COG5Q9UP83 839 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 COL4A3BPQ9Y5P4 624 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 RALGAPA2Q2PPJ7 1873 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 BRWD1Q9NSI6 2320 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 TTC28Q96AY4 2481 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 SRGAP2CP0DJJ0 459 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 TECP42680 631 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 TCEAL5Q5H9L2 206 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 TTC38Q5R3I4 469 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 SPOUT1Q5T280 376 aaKnown RBP16.4■□□□□ 0.22
IDH3A-219ENST00000560414 ECHDC2Q86YB7 292 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 KLHL23Q8NBE8 558 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PIGOQ8TEQ8 1089 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
IDH3A-219ENST00000560414 KCNK17Q96T54 332 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
IDH3A-219ENST00000560414 IFT122Q9HBG6 1241 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 RNF19AQ9NV58 838 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PPME1Q9Y570 386 aa16.4■□□□□ 0.22
IDH3A-219ENST00000560414 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 LYPLA2O95372 231 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 ITGB1P05556 798 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 BMP1P13497 986 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 COL9A1P20849 921 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
IDH3A-219ENST00000560414 DNAJB1P25685 340 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 U2AF2P26368 475 aaKnown RBP eCLIP16.39■□□□□ 0.21
IDH3A-219ENST00000560414 LAMTOR4Q0VGL1 99 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 AAK1Q2M2I8 961 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 ADAMTS19Q8TE59 1207 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 MTRQ99707 1265 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 INO80BQ9C086 356 aaPredicted RBP16.39■□□□□ 0.21
IDH3A-219ENST00000560414 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
IDH3A-219ENST00000560414 XPNPEP1Q9NQW7 623 aa16.39■□□□□ 0.21
IDH3A-219ENST00000560414 TCF20Q9UGU0 1960 aaKnown RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 FNDC1Q4ZHG4 1894 aaPredicted RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 A0A0U1RQF3 1178 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 MED24O75448 989 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 ATF7P17544 494 aaPredicted RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 CAMK1Q14012 370 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 CATSPER4Q7RTX7 472 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 CATSPER3Q86XQ3 398 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 SPPL3Q8TCT6 385 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 TCP11Q8WWU5 503 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 P2RX5Q93086 422 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 NECAB3Q96P71 396 aaPredicted RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 CASD1Q96PB1 797 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 TMEM117Q9H0C3 514 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
IDH3A-219ENST00000560414 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
IDH3A-219ENST00000560414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.37■□□□□ 0.21
IDH3A-219ENST00000560414 GJB2P29033 226 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 TRAPPC10P48553 1259 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 RARRES1P49788 294 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 PRSS12P56730 875 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 ORC2Q13416 577 aaPredicted RBP16.37■□□□□ 0.21
IDH3A-219ENST00000560414 LONRF3Q496Y0 759 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 CLLU1OSQ5K130 101 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 LCE2DQ5TA82 110 aaPredicted RBP16.37■□□□□ 0.21
IDH3A-219ENST00000560414 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
IDH3A-219ENST00000560414 LRRC55Q6ZSA7 311 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 ZNF598Q86UK7 904 aaKnown RBP16.37■□□□□ 0.21
IDH3A-219ENST00000560414 RNF149Q8NC42 400 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 CWH43Q9H720 699 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 PCDHB6Q9Y5E3 794 aa16.37■□□□□ 0.21
IDH3A-219ENST00000560414 MUC3AQ02505 3323 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 HOXA2O43364 376 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
IDH3A-219ENST00000560414 KCNA5P22460 613 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 IRS1P35568 1242 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 PHKA2P46019 1235 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 SRGAP1Q7Z6B7 1085 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 ABI1Q8IZP0 508 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 COLGALT1Q8NBJ5 622 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms