RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CNBD1Q8NA66 436 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 FAM89AQ96GI7 184 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 SYT17Q9BSW7 474 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 UTP14AQ9BVJ6 771 aaKnown RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 USP44Q9H0E7 712 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 SMURF1Q9HCE7 757 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 CWC25Q9NXE8 425 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 COL4A1P02462 1669 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 N4BP2Q86UW6 1770 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 SNED1Q8TER0 1413 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 COL11A2P13942 1736 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 hCG_2014768A0A024R1R8 64 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 TCRBV5S4A2TA0A5A2 114 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 TRAF5O00463 557 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 KCNK3O14649 394 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 GSTA4O15217 222 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 AMY2AP04746 511 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 SRGNP10124 158 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 AMY2BP19961 511 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 IBSPP21815 317 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 MECP2P51608 486 aaKnown RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 JAM2P57087 298 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 SPIRE1Q08AE8 756 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 STRN3Q13033 797 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 CRY1Q16526 586 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 AFAP1L2Q8N4X5 818 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 CHST14Q8NCH0 376 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 INTS4Q96HW7 963 aaKnown RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 API5Q9BZZ5 524 aaKnown RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 BRINP2Q9C0B6 783 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 TRMT112Q9UI30 125 aaKnown RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 NOP58Q9Y2X3 529 aaKnown RBP7.45□□□□□ -1.22
LRRC28-209ENST00000558861 SH3TC1Q8TE82 1336 aa7.45□□□□□ -1.22
LRRC28-209ENST00000558861 ZC3H12DA2A288 527 aaKnown RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NUDT19A8MXV4 375 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 GRM8O00222 908 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 SRGAP3O43295 1099 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NPTXRO95502 500 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NBPF7P0C2Y1 421 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 DPEP1P16444 411 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 CHRNA5P30532 468 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 TGFB2P61812 414 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NFKB2Q00653 900 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 SF3B3Q15393 1217 aaKnown RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 EPHA10Q5JZY3 1008 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 C20orf194Q5TEA3 1177 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 ZKSCAN2Q63HK3 967 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 STEAP3Q658P3 488 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 FSTL4Q6MZW2 842 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 ARHGAP36Q6ZRI8 547 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 PPP1R42Q7Z4L9 355 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 PTRH1Q86Y79 214 aaKnown RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NXPE1Q8N323 547 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 NETO2Q8NC67 525 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 ORAI3Q9BRQ5 295 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 SLC6A20Q9NP91 592 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 HCFC2Q9Y5Z7 792 aa7.44□□□□□ -1.22
LRRC28-209ENST00000558861 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
LRRC28-209ENST00000558861 BRCA1P38398 1863 aaKnown RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 PLIN1O60240 522 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 PAPLNO95428 1278 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 CYBBP04839 570 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 CSF1RP07333 972 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 SLC6A11P48066 632 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 CCT4P50991 539 aaKnown RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 LACTBP83111 547 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 FOXO4P98177 505 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 GPR19Q15760 415 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 RABL6Q3YEC7 729 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 RPTNQ6XPR3 784 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 DDX46Q7L014 1031 aaKnown RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 UBE3BQ7Z3V4 1068 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 RBM12BQ8IXT5 1001 aaKnown RBP7.43□□□□□ -1.22
LRRC28-209ENST00000558861 TMEM57Q8N5G2 664 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 ANKRD44Q8N8A2 993 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 C2orf69Q8N8R5 385 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 PANK1Q8TE04 598 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 CD244Q9BZW8 370 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 CABP5Q9NP86 173 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 DSEQ9UL01 958 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 RTL9Q8NET4 1388 aa7.43□□□□□ -1.22
LRRC28-209ENST00000558861 LAMB2P55268 1798 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 DLEC1Q9Y238 1755 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-209ENST00000558861 KRIT1O00522 736 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 MAN2B1O00754 1011 aa7.42□□□□□ -1.22
LRRC28-209ENST00000558861 SGSM2O43147 1006 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms