RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
SLIRP-205ENST00000556310 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
SLIRP-205ENST00000556310 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
SLIRP-205ENST00000556310 DACT1Q9NYF0 836 aa12.83□□□□□ -0.36
SLIRP-205ENST00000556310 RWDD3Q9Y3V2 267 aa12.83□□□□□ -0.36
SLIRP-205ENST00000556310 PCDHB7Q9Y5E2 793 aa12.83□□□□□ -0.36
SLIRP-205ENST00000556310 ARHGEF35A5YM69 484 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
SLIRP-205ENST00000556310 BMP15O95972 392 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 SYT1P21579 422 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 ARL2P36404 184 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 PHKA2P46019 1235 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 FAM189BP81408 668 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 IL17AQ16552 155 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 CATSPER4Q7RTX7 472 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 TMEM192Q8IY95 271 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-205ENST00000556310 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
SLIRP-205ENST00000556310 A0A087WWV3 80 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 PP2D1A8MPX8 630 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 HOXA2O43364 376 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 SRGAP2CP0DJJ0 459 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
SLIRP-205ENST00000556310 CTNNB1P35222 781 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 GATMP50440 423 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 RESTQ13127 1097 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 CAPSQ13938 189 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 TFDP1Q14186 410 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 PCBP1Q15365 356 aaKnown RBP eCLIP12.81□□□□□ -0.36
SLIRP-205ENST00000556310 ECM1Q16610 540 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 ASAP3Q8TDY4 903 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 TRAIPQ9BWF2 469 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 AGPAT5Q9NUQ2 364 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 DDX19AQ9NUU7 478 aaKnown RBP12.81□□□□□ -0.36
SLIRP-205ENST00000556310 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
SLIRP-205ENST00000556310 PIN4Q9Y237 131 aaKnown RBP12.81□□□□□ -0.36
SLIRP-205ENST00000556310 MRPL42Q9Y6G3 142 aaKnown RBP12.81□□□□□ -0.36
SLIRP-205ENST00000556310 A0A0U1RQF3 1178 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 H3BNC9 293 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 RB1P06400 928 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 GLRA2P23416 452 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 BMPR1AP36894 532 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 PTENP60484 403 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 PAN2Q504Q3 1202 aaKnown RBP12.8□□□□□ -0.36
SLIRP-205ENST00000556310 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
SLIRP-205ENST00000556310 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
SLIRP-205ENST00000556310 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 MMTAG2Q9BU76 263 aaKnown RBP12.8□□□□□ -0.36
SLIRP-205ENST00000556310 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-205ENST00000556310 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 BHMT2Q9H2M3 363 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 MYH11P35749 1972 aa12.8□□□□□ -0.36
SLIRP-205ENST00000556310 BRWD1Q9NSI6 2320 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 TBKBP1A7MCY6 615 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 TULP1O00294 542 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-205ENST00000556310 STX6O43752 255 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 ERLIN2O94905 339 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 EOMESO95936 686 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 FGFR1P11362 822 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 SKIP12755 728 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 ATF7P17544 494 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-205ENST00000556310 CYP11B2P19099 503 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 CDC25AP30304 524 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 RAB27AP51159 221 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 GPM6BQ13491 265 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 HYIQ5T013 277 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 FAM102BQ5T8I3 360 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLIRP-205ENST00000556310 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 RSPH1Q8WYR4 309 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 AK8Q96MA6 479 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 GPRC5CQ9NQ84 441 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
SLIRP-205ENST00000556310 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 SLC26A4O43511 780 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 TSPAN1O60635 241 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 EYA4O95677 639 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 AXLP30530 894 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
SLIRP-205ENST00000556310 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-205ENST00000556310 PTPROQ16827 1216 aa12.78□□□□□ -0.36
SLIRP-205ENST00000556310 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-205ENST00000556310 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms