RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PLS3P13797 630 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 TNNI1P19237 187 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 RPS12P25398 132 aaKnown RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 CNGA1P29973 690 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 GALCP54803 685 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ACTR2P61160 394 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 PRKCEQ02156 737 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 C8orf74Q6P047 294 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 CYP26A1O43174 497 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 RGS20O76081 388 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SRGAP2CP0DJJ0 459 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 DSG3P32926 999 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 GUCY2DQ02846 1103 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 PAPD7Q5XG87 772 aaKnown RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SLC30A5Q8TAD4 765 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 GINS2Q9Y248 185 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 FZD9O00144 591 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.22e-14■■■□□ 17.3
SCAF11-209ENST00000547018 GJC1P36383 396 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 MXI1P50539 228 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 BEND6Q5SZJ8 279 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 MOV10L1Q9BXT6 1211 aaKnown RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SLC9A2Q9UBY0 812 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 GRID2IPA4D2P6 1211 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 HNRNPH3P31942 346 aaKnown RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 CETN1Q12798 172 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 ASTE1Q2TB18 679 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-209ENST00000547018 TMEM63BQ5T3F8 832 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 HDXQ7Z353 690 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SIX2Q9NPC8 291 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 CTTNBP2NLQ9P2B4 639 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
SCAF11-209ENST00000547018 SSU72P8A0A1W2PR75 194 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 GJB1P08034 283 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 SUPT20HL1Q3ZLR7 823 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 TTC19Q6DKK2 380 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 POLR3FQ9H1D9 316 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 BRD3Q15059 726 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 APOBEC3FQ8IUX4 373 aaKnown RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 LRRC71Q8N4P6 559 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 NUCKS1Q9H1E3 243 aaKnown RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 EPB41L5Q9HCM4 733 aa13.8□□□□□ -0.2
SCAF11-209ENST00000547018 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-209ENST00000547018 SOX5P35711 763 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 SSR1P43307 286 aaKnown RBP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 KRT76Q01546 638 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 AADACL2Q6P093 401 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 APEX2Q9UBZ4 518 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 F8VZ95 297 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 IBSPP21815 317 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 LIG4P49917 911 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 CDK17Q00537 523 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 MESDQ14696 234 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 NAB2Q15742 525 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 CPNE8Q86YQ8 564 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 TAS1R2Q8TE23 839 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 THAP2Q9H0W7 228 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 AIPL1Q9NZN9 384 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 BTBD7Q9P203 1132 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 NFU1Q9UMS0 254 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 SGPL1O95470 568 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-209ENST00000547018 TATDN2Q93075 761 aa13.79□□□□□ -0.2
SCAF11-209ENST00000547018 ARHGEF26Q96DR7 871 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms