RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 FOSL1P15407 271 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 LMNB1P20700 586 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 S100A1P23297 94 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 IL4RP24394 825 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 SYKP43405 635 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 TNNI2P48788 182 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 TGFB2P61812 414 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 HPCAP84074 193 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 APBA1Q02410 837 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 FAM160A1Q05DH4 1040 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 PTGDRQ13258 359 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 SYDE2Q5VT97 1194 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 ANKRD13AQ8IZ07 590 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 VPS37AQ8NEZ2 397 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 ATP8B4Q8TF62 1192 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 LENG1Q96BZ8 264 aaPredicted RBP7.21□□□□□ -1.26
NECAP1-208ENST00000545807 LRRC45Q96CN5 670 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 SLF1Q9BQI6 1058 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 CCDC28BQ9BUN5 200 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 MYOZ2Q9NPC6 264 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 POLR3EQ9NVU0 708 aa7.21□□□□□ -1.26
NECAP1-208ENST00000545807 CNOT7Q9UIV1 285 aaKnown RBP7.21□□□□□ -1.26
NECAP1-208ENST00000545807 STK36Q9NRP7 1315 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 IQCA1LA6NCM1 817 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 HMGB1P1B2RPK0 211 aaPredicted RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 POLR2DO15514 142 aaKnown RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 POTEIP0CG38 1075 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 HALP42357 657 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PTGER2P43116 358 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 APLP1P51693 650 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 FANCCQ00597 558 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 MCL1Q07820 350 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PNOCQ13519 176 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 LRP8Q14114 963 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PTPAQ15257 358 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 TTC38Q5R3I4 469 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 RUFY4Q6ZNE9 571 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CACNA2D3Q8IZS8 1091 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 BLIDQ8IZY5 108 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 ATRIPQ8WXE1 791 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 HIC2Q96JB3 615 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 MAP3K14Q99558 947 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CCT7Q99832 543 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 C2orf49Q9BVC5 232 aaPredicted RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CSRNP2Q9H175 543 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 C6orf203Q9P0P8 240 aaPredicted RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 DLGAP2Q9P1A6 1054 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 A0A1W2PRG0 241 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 GMNCA6NCL1 334 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PP2D1A8MPX8 630 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 F5H6K3 240 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 TRAPPC3O43617 180 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CLASP2O75122 1294 aaKnown RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 COBLO75128 1261 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PAEPP09466 180 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PDE6CP51160 858 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 TUBA1BP68363 451 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 KLRC3Q07444 240 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 MSLNQ13421 630 aaPredicted RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 KARSQ15046 597 aaKnown RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 NPY5RQ15761 445 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CNPY1Q3B7I2 92 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 KCTD16Q68DU8 428 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 TUBA1AQ71U36 451 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 CD302Q8IX05 232 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 ADGRF4Q8IZF3 695 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PANX2Q96RD6 677 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 HSD3B7Q9H2F3 369 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PFDN4Q9NQP4 134 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 ATAD3AQ9NVI7 634 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 FAM32AQ9Y421 112 aaKnown RBP7.2□□□□□ -1.26
NECAP1-208ENST00000545807 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 HEY1Q9Y5J3 304 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 FADS3Q9Y5Q0 445 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 NAV1Q8NEY1 1877 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 ZNF541Q9H0D2 1346 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 NRXN2Q9P2S2 1712 aa7.2□□□□□ -1.26
NECAP1-208ENST00000545807 ECM29Q5VYK3 1845 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 KANSL1LA0AUZ9 987 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 CCT8L1PA6NM43 557 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 E7EVH7 732 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 YEATS4O95619 227 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 NQO1P15559 274 aaKnown RBP7.19□□□□□ -1.26
NECAP1-208ENST00000545807 NR1D1P20393 614 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 ATP1A2P50993 1020 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 NNTQ13423 1086 aa7.19□□□□□ -1.26
NECAP1-208ENST00000545807 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
NECAP1-208ENST00000545807 PTPN21Q16825 1174 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms