RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 C17orf75Q9HAS0 396 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PARVGQ9HBI0 331 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PANK4Q9NVE7 773 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PRMT7Q9NVM4 692 aaPredicted RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 LRFN2Q9ULH4 789 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 ST3GAL5Q9UNP4 418 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 PIN4Q9Y237 131 aaKnown RBP6.97□□□□□ -1.29
LTBR-212ENST00000543542 HPSEQ9Y251 543 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 SLC4A7Q9Y6M7 1214 aa6.97□□□□□ -1.29
LTBR-212ENST00000543542 ABHD14A-ACY1A0A1B0GW23 586 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TULP1O00294 542 aaPredicted RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 TRAK2O60296 914 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 BAIAP3O94812 1187 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 UPP2O95045 317 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 CXCL10P02778 98 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 PRKCBP05771 671 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 GAP43P17677 238 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 CASP1P29466 404 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 NPTX2P47972 431 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 EFNA5P52803 228 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 EPHB4P54760 987 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 PTENP60484 403 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 POU5F1BQ06416 359 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 PRPF4BQ13523 1007 aaKnown RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 SHHQ15465 462 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 E2F4Q16254 413 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 MAPK6Q16659 721 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TMEM240Q5SV17 173 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 C9orf50Q5SZB4 431 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TWF2Q6IBS0 349 aaKnown RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 FAM117BQ6P1L5 589 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 KRBA2Q6ZNG9 492 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 STXBP4Q6ZWJ1 553 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 SFR1Q86XK3 245 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TDHQ8IZJ6 230 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 MYOCDQ8IZQ8 938 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TMEM87AQ8NBN3 555 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 RNF169Q8NCN4 708 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TMEM40Q8WWA1 233 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 BSNDQ8WZ55 320 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 PAGE5Q96GU1 130 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 CPB2Q96IY4 423 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 ADAM2Q99965 735 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 GDF15Q99988 308 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 ZBED2Q9BTP6 218 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 KIFC3Q9BVG8 833 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 TRIM6Q9C030 488 aaPredicted RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 AGO3Q9H9G7 860 aaKnown RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 MRPL44Q9H9J2 332 aaKnown RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 ERVK-5Q9HDB9 667 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 EXOC1Q9NV70 894 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 KBTBD4Q9NVX7 518 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 RNF216Q9NWF9 866 aaPredicted RBP6.96□□□□□ -1.3
LTBR-212ENST00000543542 TBC1D7Q9P0N9 293 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 PHLPP2Q6ZVD8 1323 aa6.96□□□□□ -1.3
LTBR-212ENST00000543542 FAM237AA0A1B0GTK4 181 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 ACTN4O43707 911 aaKnown RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 GTPBP6O43824 516 aaPredicted RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 NR1I2O75469 434 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 GCNT3O95395 438 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 STAG3L1P0CL83 205 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 NMT1P30419 496 aaKnown RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 AXLP30530 894 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 ABCD1P33897 745 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 BMP8BP34820 402 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 MBTD1Q05BQ5 628 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 COASYQ13057 564 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 MAPK7Q13164 816 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 CUL4BQ13620 913 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 GPNMBQ14956 572 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 POSTNQ15063 836 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 PCBP1Q15365 356 aaKnown RBP eCLIP6.95□□□□□ -1.3
LTBR-212ENST00000543542 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 NOTUMQ6P988 496 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 C16orf59Q7L2K0 433 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 HAUS6Q7Z4H7 955 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 APBB1IPQ7Z5R6 666 aaPredicted RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 HACE1Q8IYU2 909 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 SYCP3Q8IZU3 236 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 DAW1Q8N136 415 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 SLC17A8Q8NDX2 589 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 PRIMPOLQ96LW4 560 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 C7orf25Q9BPX7 421 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 ADPGKQ9BRR6 497 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 TCHPQ9BT92 498 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 NFKBIZQ9BYH8 718 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 TRIM9Q9C026 710 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 MINDY3Q9H8M7 445 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 C1orf112Q9NSG2 853 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 DACT1Q9NYF0 836 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
LTBR-212ENST00000543542 COLQQ9Y215 455 aaPredicted RBP6.95□□□□□ -1.3
LTBR-212ENST00000543542 MICAL3Q7RTP6 2002 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PVALEFA0A1B0GWK0 134 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 ACKR2O00590 384 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms