RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CBWD1Q9BRT8 395 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 KCNF1Q9H3M0 494 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 SETD4Q9NVD3 440 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 EXOC7Q9UPT5 735 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 Q9Y3F1 56 aa7.57□□□□□ -1.2
CDH19-203ENST00000540086 SLC16A3O15427 465 aaKnown RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 SEPT4O43236 478 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 EXOC3O60645 756 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 FKTNO75072 461 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 DUSP11O75319 330 aaKnown RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 PGK1P00558 417 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 F2P00734 622 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 EPB41P11171 864 aaKnown RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 HOXD10P28358 340 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 KLK7P49862 253 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 TBX2Q13207 712 aaPredicted RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 MFSD10Q14728 455 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 NFIL3Q16649 462 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 VWA3BQ502W6 1294 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 BRDTQ58F21 947 aaPredicted RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 MARCH8Q5T0T0 291 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 FKBP15Q5T1M5 1219 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 ARMCX5Q6P1M9 558 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 SLC39A4Q6P5W5 647 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 RHPN2Q8IUC4 686 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 TRIM59Q8IWR1 403 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 EXOC8Q8IYI6 725 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 FAM186BQ8IYM0 893 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 RETREG2Q8NC44 543 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 ZSWIM2Q8NEG5 633 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 RAET1EQ8TD07 263 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 BICD1Q96G01 975 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 NLRP4Q96MN2 994 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 NDST4Q9H3R1 872 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 DMAC2Q9NW81 257 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 ARMCX3Q9UH62 379 aaPredicted RBP7.56□□□□□ -1.2
CDH19-203ENST00000540086 PCNTO95613 3336 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 DOCK3Q8IZD9 2030 aa7.56□□□□□ -1.2
CDH19-203ENST00000540086 COL1A2P08123 1366 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 GOLGA8IPA6NC78 632 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 GOLGA8JA6NMD2 632 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 H0YCG3 227 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 K7ERI5 159 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 HNRNPDLO14979 420 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 SMIM10L2AP0DMW4 78 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 SMIM10L2BP0DMW5 78 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 RARBP10826 455 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 ADSSP30520 456 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 PSMC2P35998 433 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 PSEN2P49810 448 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 DNM2P50570 870 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 GSDMDP57764 484 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 STRN3Q13033 797 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 MXD4Q14582 209 aaPredicted RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 SYCP1Q15431 976 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 DCAF17Q5H9S7 520 aaPredicted RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 MTHFD1LQ6UB35 978 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 FRMD5Q7Z6J6 570 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 LINC01465Q8N7H1 131 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 LMBR1Q8WVP7 490 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 RNF25Q96BH1 459 aaPredicted RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 ERO1AQ96HE7 468 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 SAGE1Q9NXZ1 904 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 KCNG1Q9UIX4 513 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 AKT3Q9Y243 479 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 FRMD4BQ9Y2L6 1034 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDH19-203ENST00000540086 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 MAGEB2O15479 319 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 VTNP04004 478 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 HMGCRP04035 888 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 EDN1P05305 212 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 SFPQP23246 707 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDH19-203ENST00000540086 LIG4P49917 911 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 ADKP55263 362 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 GJA9P57773 515 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 RBL2Q08999 1139 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 HIC1Q14526 733 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 CDCA2Q69YH5 1023 aaPredicted RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 PPFIBP1Q86W92 1011 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 LRRC8AQ8IWT6 810 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 CCDC150Q8NCX0 1101 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 BORCS6Q96GS4 357 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms